RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PLPPR3Q6T4P5 718 aa32.29■■■□□ 2.76
TSPAN4-206ENST00000397408 RNF17Q9BXT8 1623 aaKnown RBP32.29■■■□□ 2.76
TSPAN4-206ENST00000397408 CLTCQ00610 1675 aaKnown RBP32.26■■■□□ 2.76
TSPAN4-206ENST00000397408 ROCK1Q13464 1354 aa32.26■■■□□ 2.75
TSPAN4-206ENST00000397408 PPP6R1Q9UPN7 881 aa32.24■■■□□ 2.75
TSPAN4-206ENST00000397408 MROH2AA6NES4 1674 aa32.24■■■□□ 2.75
TSPAN4-206ENST00000397408 CEBPAP49715 358 aaPredicted RBP32.22■■■□□ 2.75
TSPAN4-206ENST00000397408 MROH1Q8NDA8 1641 aa32.22■■■□□ 2.75
TSPAN4-206ENST00000397408 C3P01024 1663 aa32.21■■■□□ 2.75
TSPAN4-206ENST00000397408 KDM5DQ9BY66 1539 aa32.21■■■□□ 2.75
TSPAN4-206ENST00000397408 FAM135AQ9P2D6 1515 aa32.2■■■□□ 2.75
TSPAN4-206ENST00000397408 ANKRD50Q9ULJ7 1429 aa32.19■■■□□ 2.74
TSPAN4-206ENST00000397408 PRDM15P57071 1507 aaPredicted RBP32.16■■■□□ 2.74
TSPAN4-206ENST00000397408 ZMYM3Q14202 1370 aa32.16■■■□□ 2.74
TSPAN4-206ENST00000397408 DEPDC5O75140 1603 aa32.15■■■□□ 2.74
TSPAN4-206ENST00000397408 WASHC2CQ9Y4E1 1318 aa32.15■■■□□ 2.74
TSPAN4-206ENST00000397408 ABCC3O15438 1527 aa32.13■■■□□ 2.73
TSPAN4-206ENST00000397408 ZC3H13Q5T200 1668 aaKnown RBP32.12■■■□□ 2.73
TSPAN4-206ENST00000397408 CEP152O94986 1710 aa32.09■■■□□ 2.73
TSPAN4-206ENST00000397408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.09■■■□□ 2.73
TSPAN4-206ENST00000397408 KANK1Q14678 1352 aa32.05■■■□□ 2.72
TSPAN4-206ENST00000397408 NPATQ14207 1427 aa32.03■■■□□ 2.72
TSPAN4-206ENST00000397408 PZPP20742 1482 aa32.03■■■□□ 2.72
TSPAN4-206ENST00000397408 GCC2Q8IWJ2 1684 aa32.02■■■□□ 2.72
TSPAN4-206ENST00000397408 VWDEQ8N2E2 1590 aa32.02■■■□□ 2.72
TSPAN4-206ENST00000397408 CAMSAP1Q5T5Y3 1602 aa32.02■■■□□ 2.72
TSPAN4-206ENST00000397408 PREX1Q8TCU6 1659 aa32.02■■■□□ 2.72
TSPAN4-206ENST00000397408 LMTK3Q96Q04 1460 aa32.01■■■□□ 2.72
TSPAN4-206ENST00000397408 UNC13BO14795 1591 aa32.01■■■□□ 2.71
TSPAN4-206ENST00000397408 NAIPQ13075 1403 aa32.01■■■□□ 2.71
TSPAN4-206ENST00000397408 SETD1BQ9UPS6 1966 aaKnown RBP32.01■■■□□ 2.71
TSPAN4-206ENST00000397408 HFM1A2PYH4 1435 aa31.99■■■□□ 2.71
TSPAN4-206ENST00000397408 LMTK2Q8IWU2 1503 aa31.96■■■□□ 2.71
TSPAN4-206ENST00000397408 UHRF1BP1Q6BDS2 1440 aa31.96■■■□□ 2.71
TSPAN4-206ENST00000397408 FBXO31Q5XUX0 539 aaPredicted RBP31.94■■■□□ 2.7
TSPAN4-206ENST00000397408 ARHGAP31Q2M1Z3 1444 aa31.91■■■□□ 2.7
TSPAN4-206ENST00000397408 MYO3AQ8NEV4 1616 aa31.91■■■□□ 2.7
TSPAN4-206ENST00000397408 TNRQ92752 1358 aa31.89■■■□□ 2.7
TSPAN4-206ENST00000397408 EFCAB6Q5THR3 1501 aa31.89■■■□□ 2.7
TSPAN4-206ENST00000397408 ERVK-7P63135 1459 aa31.88■■■□□ 2.69
TSPAN4-206ENST00000397408 IQGAP3Q86VI3 1631 aa31.87■■■□□ 2.69
TSPAN4-206ENST00000397408 SPATA31D1Q6ZQQ2 1576 aa31.86■■■□□ 2.69
TSPAN4-206ENST00000397408 NUP155O75694 1391 aa31.86■■■□□ 2.69
TSPAN4-206ENST00000397408 TET3O43151 1660 aa31.85■■■□□ 2.69
TSPAN4-206ENST00000397408 HSPA2P54652 639 aa31.85■■■□□ 2.69
TSPAN4-206ENST00000397408 CFAP65Q6ZU64 1925 aaKnown RBP31.85■■■□□ 2.69
TSPAN4-206ENST00000397408 ZNF142P52746 1687 aaPredicted RBP31.82■■■□□ 2.68
TSPAN4-206ENST00000397408 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
TSPAN4-206ENST00000397408 A2ML1A8K2U0 1454 aa31.76■■■□□ 2.68
TSPAN4-206ENST00000397408 RPRD2Q5VT52 1461 aaKnown RBP31.76■■■□□ 2.68
TSPAN4-206ENST00000397408 NLRP1Q9C000 1473 aa31.76■■■□□ 2.68
TSPAN4-206ENST00000397408 E9PCH4 1651 aa31.73■■■□□ 2.67
TSPAN4-206ENST00000397408 SETD5Q9C0A6 1442 aa31.73■■■□□ 2.67
TSPAN4-206ENST00000397408 TRIM52Q96A61 297 aa31.72■■■□□ 2.67
TSPAN4-206ENST00000397408 NOS1P29475 1434 aa31.7■■■□□ 2.67
TSPAN4-206ENST00000397408 SYNMO15061 1565 aa31.7■■■□□ 2.66
TSPAN4-206ENST00000397408 UGGT1Q9NYU2 1555 aa31.65■■■□□ 2.66
TSPAN4-206ENST00000397408 RAB3GAP2Q9H2M9 1393 aa31.64■■■□□ 2.65
TSPAN4-206ENST00000397408 PLA2R1Q13018 1463 aa31.6■■■□□ 2.65
TSPAN4-206ENST00000397408 STRCQ7RTU9 1775 aa31.6■■■□□ 2.65
TSPAN4-206ENST00000397408 PIK3C2BO00750 1634 aa31.6■■■□□ 2.65
TSPAN4-206ENST00000397408 UBR1Q8IWV7 1749 aa31.59■■■□□ 2.65
TSPAN4-206ENST00000397408 SLC4A1APQ9BWU0 796 aaKnown RBP31.58■■■□□ 2.65
TSPAN4-206ENST00000397408 IDI1Q13907 227 aa31.57■■■□□ 2.64
TSPAN4-206ENST00000397408 THEMISQ8N1K5 641 aaPredicted RBP31.56■■■□□ 2.64
TSPAN4-206ENST00000397408 SPHKAPQ2M3C7 1700 aa31.55■■■□□ 2.64
TSPAN4-206ENST00000397408 SLC52A1Q9NWF4 448 aa31.55■■■□□ 2.64
TSPAN4-206ENST00000397408 ACIN1Q9UKV3 1341 aaKnown RBP31.55■■■□□ 2.64
TSPAN4-206ENST00000397408 PKD2Q13563 968 aa31.54■■■□□ 2.64
TSPAN4-206ENST00000397408 ADGRB3O60242 1522 aa31.52■■■□□ 2.64
TSPAN4-206ENST00000397408 STAG3Q9UJ98 1225 aa31.51■■■□□ 2.64
TSPAN4-206ENST00000397408 PTPRTO14522 1441 aa31.51■■■□□ 2.63
TSPAN4-206ENST00000397408 NCKAP5LQ9HCH0 1330 aa31.5■■■□□ 2.63
TSPAN4-206ENST00000397408 KDM5AP29375 1690 aaKnown RBP31.5■■■□□ 2.63
TSPAN4-206ENST00000397408 MPHOSPH9Q99550 1183 aa31.48■■■□□ 2.63
TSPAN4-206ENST00000397408 POLR1AO95602 1720 aaPredicted RBP31.47■■■□□ 2.63
TSPAN4-206ENST00000397408 TRPM2O94759 1503 aa31.46■■■□□ 2.63
TSPAN4-206ENST00000397408 DMRT2Q9Y5R5 561 aa31.45■■■□□ 2.63
TSPAN4-206ENST00000397408 TRIM26Q12899 539 aaPredicted RBP31.43■■■□□ 2.62
TSPAN4-206ENST00000397408 FOXD1Q16676 465 aa31.43■■■□□ 2.62
TSPAN4-206ENST00000397408 SLIT1O75093 1534 aa31.43■■■□□ 2.62
TSPAN4-206ENST00000397408 ARHGAP23Q9P227 1491 aa31.42■■■□□ 2.62
TSPAN4-206ENST00000397408 HRCP23327 699 aa31.42■■■□□ 2.62
TSPAN4-206ENST00000397408 ANKLE2Q86XL3 938 aa31.42■■■□□ 2.62
TSPAN4-206ENST00000397408 NEURL4Q96JN8 1562 aa31.42■■■□□ 2.62
TSPAN4-206ENST00000397408 TMEM131LA2VDJ0 1609 aa31.42■■■□□ 2.62
TSPAN4-206ENST00000397408 MYO5BQ9ULV0 1848 aa31.4■■■□□ 2.62
TSPAN4-206ENST00000397408 TMEM2Q9UHN6 1383 aa31.4■■■□□ 2.62
TSPAN4-206ENST00000397408 CLTCL1P53675 1640 aa31.4■■■□□ 2.62
TSPAN4-206ENST00000397408 CHGAP10645 457 aaKnown RBP31.4■■■□□ 2.62
TSPAN4-206ENST00000397408 SCAF11Q99590 1463 aaKnown RBP31.37■■■□□ 2.61
TSPAN4-206ENST00000397408 NPHP4O75161 1426 aaPredicted RBP31.33■■■□□ 2.61
TSPAN4-206ENST00000397408 MED14O60244 1454 aa31.33■■■□□ 2.61
TSPAN4-206ENST00000397408 LTKP29376 864 aa31.32■■■□□ 2.61
TSPAN4-206ENST00000397408 TXNDC2Q86VQ3 553 aa31.32■■■□□ 2.61
TSPAN4-206ENST00000397408 EID1Q9Y6B2 187 aa31.32■■■□□ 2.61
TSPAN4-206ENST00000397408 IQGAP1P46940 1657 aa31.3■■■□□ 2.6
TSPAN4-206ENST00000397408 ZFYVE9O95405 1425 aa31.29■■■□□ 2.6
TSPAN4-206ENST00000397408 RIMS2Q9UQ26 1411 aa31.29■■■□□ 2.6
TSPAN4-206ENST00000397408 KIF1BO60333 1816 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms