RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 HMMRO75330 724 aa6.52□□□□□ -1.37
A1CF-207ENST00000395495 HSP90B1P14625 803 aaKnown RBP6.52□□□□□ -1.37
A1CF-207ENST00000395495 DDX10Q13206 875 aaKnown RBP6.52□□□□□ -1.37
A1CF-207ENST00000395495 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
A1CF-207ENST00000395495 CHMP3Q9Y3E7 222 aa6.52□□□□□ -1.37
A1CF-207ENST00000395495 PTPRGP23470 1445 aa6.52□□□□□ -1.37
A1CF-207ENST00000395495 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
A1CF-207ENST00000395495 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
A1CF-207ENST00000395495 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
A1CF-207ENST00000395495 TPD52L1Q16890 204 aaPredicted RBP6.51□□□□□ -1.37
A1CF-207ENST00000395495 IPO8O15397 1037 aaKnown RBP6.51□□□□□ -1.37
A1CF-207ENST00000395495 CDR1P51861 262 aa6.51□□□□□ -1.37
A1CF-207ENST00000395495 CARMIL2Q6F5E8 1435 aa6.51□□□□□ -1.37
A1CF-207ENST00000395495 HDGFL2Q7Z4V5 671 aaPredicted RBP6.51□□□□□ -1.37
A1CF-207ENST00000395495 CCAR1Q8IX12 1150 aaKnown RBP6.51□□□□□ -1.37
A1CF-207ENST00000395495 FRAT1Q92837 279 aaPredicted RBP6.51□□□□□ -1.37
A1CF-207ENST00000395495 ODF2Q5BJF6 829 aa6.51□□□□□ -1.37
A1CF-207ENST00000395495 SPAG9O60271 1321 aaKnown RBP6.5□□□□□ -1.37
A1CF-207ENST00000395495 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
A1CF-207ENST00000395495 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
A1CF-207ENST00000395495 CREBRFQ8IUR6 639 aa6.5□□□□□ -1.37
A1CF-207ENST00000395495 STK31Q9BXU1 1019 aa6.5□□□□□ -1.37
A1CF-207ENST00000395495 AQRO60306 1485 aaKnown RBP eCLIP6.5□□□□□ -1.374e-7■■■□□ 15.4
A1CF-207ENST00000395495 RGL3Q3MIN7 710 aa6.49□□□□□ -1.37
A1CF-207ENST00000395495 RSF1Q96T23 1441 aaPredicted RBP6.49□□□□□ -1.37
A1CF-207ENST00000395495 IPO7O95373 1038 aaKnown RBP6.49□□□□□ -1.37
A1CF-207ENST00000395495 SMC4Q9NTJ3 1288 aa6.49□□□□□ -1.37
A1CF-207ENST00000395495 PES1O00541 588 aaKnown RBP6.49□□□□□ -1.37
A1CF-207ENST00000395495 SOX12O15370 315 aa6.49□□□□□ -1.37
A1CF-207ENST00000395495 CT47A1Q5JQC4 288 aaPredicted RBP6.49□□□□□ -1.37
A1CF-207ENST00000395495 GPS2Q13227 327 aa6.49□□□□□ -1.37
A1CF-207ENST00000395495 PAXIP1Q6ZW49 1069 aaPredicted RBP6.49□□□□□ -1.37
A1CF-207ENST00000395495 FANCD2Q9BXW9 1451 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 SYNE3Q6ZMZ3 975 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 ZNF526Q8TF50 670 aaPredicted RBP6.48□□□□□ -1.37
A1CF-207ENST00000395495 GAPVD1Q14C86 1478 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 HNRNPMP52272 730 aaKnown RBP eCLIP6.48□□□□□ -1.37
A1CF-207ENST00000395495 ANKRD20A12PQ8NF67 263 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 GBP4Q96PP9 640 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 RAPGEF3O95398 923 aa6.48□□□□□ -1.37
A1CF-207ENST00000395495 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
A1CF-207ENST00000395495 ZRSR2Q15696 482 aaKnown RBP6.48□□□□□ -1.37
A1CF-207ENST00000395495 PSDA5PKW4 1024 aaPredicted RBP6.47□□□□□ -1.37
A1CF-207ENST00000395495 SF3A1Q15459 793 aaKnown RBP6.47□□□□□ -1.37
A1CF-207ENST00000395495 EFCAB2Q5VUJ9 269 aa6.47□□□□□ -1.37
A1CF-207ENST00000395495 TNS4Q8IZW8 715 aa6.46□□□□□ -1.37
A1CF-207ENST00000395495 QTRT2Q9H974 415 aaKnown RBP6.46□□□□□ -1.37
A1CF-207ENST00000395495 RAD21O60216 631 aa6.46□□□□□ -1.37
A1CF-207ENST00000395495 EVA1CP58658 441 aa6.46□□□□□ -1.37
A1CF-207ENST00000395495 CPLX2Q6PUV4 134 aaKnown RBP6.46□□□□□ -1.37
A1CF-207ENST00000395495 RGS3P49796 1198 aa6.46□□□□□ -1.38
A1CF-207ENST00000395495 AMER1Q5JTC6 1135 aaPredicted RBP6.46□□□□□ -1.38
A1CF-207ENST00000395495 CARD11Q9BXL7 1154 aa6.46□□□□□ -1.38
A1CF-207ENST00000395495 THEMISQ8N1K5 641 aaPredicted RBP6.46□□□□□ -1.38
A1CF-207ENST00000395495 PATL2C9JE40 543 aaKnown RBP6.45□□□□□ -1.38
A1CF-207ENST00000395495 CFDP1Q9UEE9 299 aaPredicted RBP6.45□□□□□ -1.38
A1CF-207ENST00000395495 DHX16O60231 1041 aaKnown RBP6.45□□□□□ -1.38
A1CF-207ENST00000395495 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
A1CF-207ENST00000395495 VSIG10Q8N0Z9 540 aa6.45□□□□□ -1.38
A1CF-207ENST00000395495 PHF14O94880 888 aa6.45□□□□□ -1.38
A1CF-207ENST00000395495 MORC1Q86VD1 984 aa6.45□□□□□ -1.38
A1CF-207ENST00000395495 WDHD1O75717 1129 aaPredicted RBP6.45□□□□□ -1.38
A1CF-207ENST00000395495 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 TMF1P82094 1093 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 IFT140Q96RY7 1462 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 CCDC173Q0VFZ6 552 aa6.44□□□□□ -1.38
A1CF-207ENST00000395495 PCMTD1Q96MG8 357 aaPredicted RBP6.44□□□□□ -1.38
A1CF-207ENST00000395495 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
A1CF-207ENST00000395495 FBXW7Q969H0 707 aa6.43□□□□□ -1.38
A1CF-207ENST00000395495 HOOK1Q9UJC3 728 aaKnown RBP6.43□□□□□ -1.38
A1CF-207ENST00000395495 MYO6Q9UM54 1294 aa6.43□□□□□ -1.38
A1CF-207ENST00000395495 HMGB2P26583 209 aaKnown RBP6.43□□□□□ -1.38
A1CF-207ENST00000395495 PPM1FP49593 454 aaPredicted RBP6.43□□□□□ -1.38
A1CF-207ENST00000395495 SEPT11Q9NVA2 429 aaKnown RBP6.43□□□□□ -1.38
A1CF-207ENST00000395495 TRIM29Q14134 588 aa6.43□□□□□ -1.38
A1CF-207ENST00000395495 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
A1CF-207ENST00000395495 ANKRD18AQ8IVF6 992 aa6.43□□□□□ -1.38
A1CF-207ENST00000395495 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 NCAPD3P42695 1498 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 ATAD2BQ9ULI0 1458 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 DCTN1Q14203 1278 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 ARHGEF11O15085 1522 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 MAP3K9P80192 1104 aa6.42□□□□□ -1.38
A1CF-207ENST00000395495 NEXNQ0ZGT2 675 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 TCERG1O14776 1098 aaKnown RBP6.41□□□□□ -1.38
A1CF-207ENST00000395495 TRIM21P19474 475 aaKnown RBP6.41□□□□□ -1.38
A1CF-207ENST00000395495 DNAI2Q9GZS0 605 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 RRP7BPQ9NSQ0 103 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 ZFYVE27Q5T4F4 411 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 H3BQV1 296 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 APBB1O00213 710 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 IFFO2Q5TF58 517 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 CCDC191Q8NCU4 936 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 HSP90AB2PQ58FF8 381 aa6.41□□□□□ -1.38
A1CF-207ENST00000395495 BCL11BQ9C0K0 894 aaPredicted RBP6.41□□□□□ -1.38
A1CF-207ENST00000395495 PRG4Q92954 1404 aaPredicted RBP6.4□□□□□ -1.38
A1CF-207ENST00000395495 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms