RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PPM1GO15355 546 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-209ENST00000394804 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
UBE2D3-209ENST00000394804 TROQ12816 1431 aaPredicted RBP15.3■□□□□ 0.04
UBE2D3-209ENST00000394804 ADCY10Q96PN6 1610 aa15.29■□□□□ 0.04
UBE2D3-209ENST00000394804 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-209ENST00000394804 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
UBE2D3-209ENST00000394804 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-209ENST00000394804 CCDC144AA2RUR9 1427 aa15.29■□□□□ 0.04
UBE2D3-209ENST00000394804 ABCC5O15440 1437 aa15.28■□□□□ 0.04
UBE2D3-209ENST00000394804 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
UBE2D3-209ENST00000394804 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-209ENST00000394804 ATP10BO94823 1461 aa15.27■□□□□ 0.04
UBE2D3-209ENST00000394804 RRP1P56182 461 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-209ENST00000394804 ABCA8O94911 1581 aa15.27■□□□□ 0.04
UBE2D3-209ENST00000394804 NEFMP07197 916 aa15.26■□□□□ 0.03
UBE2D3-209ENST00000394804 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-209ENST00000394804 UPF2Q9HAU5 1272 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-209ENST00000394804 SMG6Q86US8 1419 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-209ENST00000394804 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-209ENST00000394804 ASXL2Q76L83 1435 aa15.24■□□□□ 0.03
UBE2D3-209ENST00000394804 EXOC6Q8TAG9 804 aa15.23■□□□□ 0.03
UBE2D3-209ENST00000394804 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-209ENST00000394804 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
UBE2D3-209ENST00000394804 MSH5O43196 834 aa15.21■□□□□ 0.03
UBE2D3-209ENST00000394804 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
UBE2D3-209ENST00000394804 KDM5BQ9UGL1 1544 aa15.2■□□□□ 0.02
UBE2D3-209ENST00000394804 PANK3Q9H999 370 aa15.2■□□□□ 0.02
UBE2D3-209ENST00000394804 RGS3P49796 1198 aa15.2■□□□□ 0.02
UBE2D3-209ENST00000394804 C9orf84Q5VXU9 1444 aa15.2■□□□□ 0.02
UBE2D3-209ENST00000394804 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-209ENST00000394804 CAMSAP2Q08AD1 1489 aa15.19■□□□□ 0.02
UBE2D3-209ENST00000394804 EFCAB2Q5VUJ9 269 aa15.18■□□□□ 0.02
UBE2D3-209ENST00000394804 PDE4AP27815 886 aa15.17■□□□□ 0.02
UBE2D3-209ENST00000394804 KANK1Q14678 1352 aa15.16■□□□□ 0.02
UBE2D3-209ENST00000394804 WDR7Q9Y4E6 1490 aa15.15■□□□□ 0.02
UBE2D3-209ENST00000394804 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
UBE2D3-209ENST00000394804 MS4A1P11836 297 aa15.14■□□□□ 0.01
UBE2D3-209ENST00000394804 BECN1Q14457 450 aa15.14■□□□□ 0.01
UBE2D3-209ENST00000394804 PLIN1O60240 522 aa15.14■□□□□ 0.01
UBE2D3-209ENST00000394804 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
UBE2D3-209ENST00000394804 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
UBE2D3-209ENST00000394804 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
UBE2D3-209ENST00000394804 LRRIQ1Q96JM4 1722 aa15.11■□□□□ 0.01
UBE2D3-209ENST00000394804 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-209ENST00000394804 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
UBE2D3-209ENST00000394804 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
UBE2D3-209ENST00000394804 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
UBE2D3-209ENST00000394804 FRAT1Q92837 279 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-209ENST00000394804 SPAG9O60271 1321 aaKnown RBP15.09■□□□□ 0.01
UBE2D3-209ENST00000394804 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0.01
UBE2D3-209ENST00000394804 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
UBE2D3-209ENST00000394804 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
UBE2D3-209ENST00000394804 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
UBE2D3-209ENST00000394804 CENPQQ7L2Z9 268 aaPredicted RBP15.07■□□□□ 0
UBE2D3-209ENST00000394804 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
UBE2D3-209ENST00000394804 CD109Q6YHK3 1445 aa15.07■□□□□ 0
UBE2D3-209ENST00000394804 USP35Q9P2H5 1018 aa15.07■□□□□ 0
UBE2D3-209ENST00000394804 ABCC10Q5T3U5 1492 aa15.07■□□□□ 0
UBE2D3-209ENST00000394804 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
UBE2D3-209ENST00000394804 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
UBE2D3-209ENST00000394804 MORC1Q86VD1 984 aa15.05■□□□□ 0
UBE2D3-209ENST00000394804 DNMT1P26358 1616 aaKnown RBP15.05■□□□□ 0
UBE2D3-209ENST00000394804 KIF14Q15058 1648 aa15.05■□□□□ -0
UBE2D3-209ENST00000394804 TSPOAP1O95153 1857 aa15.04■□□□□ -0
UBE2D3-209ENST00000394804 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
UBE2D3-209ENST00000394804 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
UBE2D3-209ENST00000394804 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
UBE2D3-209ENST00000394804 KIF3BO15066 747 aa15.03■□□□□ -0
UBE2D3-209ENST00000394804 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
UBE2D3-209ENST00000394804 RTN4Q9NQC3 1192 aaKnown RBP15.02□□□□□ -0.01
UBE2D3-209ENST00000394804 PZPP20742 1482 aa15.02□□□□□ -0.01
UBE2D3-209ENST00000394804 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
UBE2D3-209ENST00000394804 STAC3Q96MF2 364 aa15□□□□□ -0.01
UBE2D3-209ENST00000394804 DIP2BQ9P265 1576 aa15□□□□□ -0.01
UBE2D3-209ENST00000394804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15□□□□□ -0.016e-33■□□□□ 10.7
UBE2D3-209ENST00000394804 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
UBE2D3-209ENST00000394804 KDM6BO15054 1643 aa14.99□□□□□ -0.01
UBE2D3-209ENST00000394804 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
UBE2D3-209ENST00000394804 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
UBE2D3-209ENST00000394804 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 E9PSI1 815 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 APAF1O14727 1248 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 MAPK8IP3Q9UPT6 1336 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
UBE2D3-209ENST00000394804 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
UBE2D3-209ENST00000394804 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
UBE2D3-209ENST00000394804 ARXQ96QS3 562 aa14.96□□□□□ -0.01
UBE2D3-209ENST00000394804 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
UBE2D3-209ENST00000394804 FANCAO15360 1455 aa14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 U2SURPO15042 1029 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 AFAP1Q8N556 730 aa14.94□□□□□ -0.02
UBE2D3-209ENST00000394804 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms