RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 ROCK1Q13464 1354 aa29.05■■■□□ 2.24
TRPT1-203ENST00000394547 CHIC2Q9UKJ5 165 aa29.05■■■□□ 2.24
TRPT1-203ENST00000394547 KIF3BO15066 747 aa29.03■■■□□ 2.24
TRPT1-203ENST00000394547 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
TRPT1-203ENST00000394547 RRP7BPQ9NSQ0 103 aa29.03■■■□□ 2.24
TRPT1-203ENST00000394547 GGT6Q6P531 493 aa29.01■■■□□ 2.23
TRPT1-203ENST00000394547 CLTCQ00610 1675 aaKnown RBP29■■■□□ 2.23
TRPT1-203ENST00000394547 KDM5DQ9BY66 1539 aa28.99■■■□□ 2.23
TRPT1-203ENST00000394547 DEPDC5O75140 1603 aa28.98■■■□□ 2.23
TRPT1-203ENST00000394547 C3P01024 1663 aa28.98■■■□□ 2.23
TRPT1-203ENST00000394547 ZC3H13Q5T200 1668 aaKnown RBP28.98■■■□□ 2.23
TRPT1-203ENST00000394547 MROH1Q8NDA8 1641 aa28.98■■■□□ 2.23
TRPT1-203ENST00000394547 PRDM15P57071 1507 aaPredicted RBP28.96■■■□□ 2.23
TRPT1-203ENST00000394547 ANKRD50Q9ULJ7 1429 aa28.94■■■□□ 2.22
TRPT1-203ENST00000394547 ITGAEP38570 1179 aa28.92■■■□□ 2.22
TRPT1-203ENST00000394547 ZMYM3Q14202 1370 aa28.89■■■□□ 2.22
TRPT1-203ENST00000394547 ABCC3O15438 1527 aa28.88■■■□□ 2.21
TRPT1-203ENST00000394547 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
TRPT1-203ENST00000394547 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
TRPT1-203ENST00000394547 NPATQ14207 1427 aa28.85■■■□□ 2.21
TRPT1-203ENST00000394547 VWDEQ8N2E2 1590 aa28.84■■■□□ 2.21
TRPT1-203ENST00000394547 CEP152O94986 1710 aa28.84■■■□□ 2.21
TRPT1-203ENST00000394547 UNC13BO14795 1591 aa28.84■■■□□ 2.21
TRPT1-203ENST00000394547 PREX1Q8TCU6 1659 aa28.83■■■□□ 2.21
TRPT1-203ENST00000394547 CEBPAP49715 358 aaPredicted RBP28.82■■■□□ 2.2
TRPT1-203ENST00000394547 KANK1Q14678 1352 aa28.82■■■□□ 2.2
TRPT1-203ENST00000394547 CAMSAP1Q5T5Y3 1602 aa28.81■■■□□ 2.2
TRPT1-203ENST00000394547 LMTK2Q8IWU2 1503 aa28.81■■■□□ 2.2
TRPT1-203ENST00000394547 PZPP20742 1482 aa28.81■■■□□ 2.2
TRPT1-203ENST00000394547 SETD1BQ9UPS6 1966 aaKnown RBP28.81■■■□□ 2.2
TRPT1-203ENST00000394547 HFM1A2PYH4 1435 aa28.79■■■□□ 2.2
TRPT1-203ENST00000394547 PLPPR3Q6T4P5 718 aa28.79■■■□□ 2.2
TRPT1-203ENST00000394547 NAIPQ13075 1403 aa28.77■■■□□ 2.2
TRPT1-203ENST00000394547 LMTK3Q96Q04 1460 aa28.75■■■□□ 2.19
TRPT1-203ENST00000394547 ARHGAP31Q2M1Z3 1444 aa28.75■■■□□ 2.19
TRPT1-203ENST00000394547 UHRF1BP1Q6BDS2 1440 aa28.72■■■□□ 2.19
TRPT1-203ENST00000394547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.72■■■□□ 2.196e-6■□□□□ 8.3
TRPT1-203ENST00000394547 IQGAP3Q86VI3 1631 aa28.71■■■□□ 2.19
TRPT1-203ENST00000394547 EFCAB6Q5THR3 1501 aa28.69■■■□□ 2.18
TRPT1-203ENST00000394547 MYO3AQ8NEV4 1616 aa28.69■■■□□ 2.18
TRPT1-203ENST00000394547 SPATA31D1Q6ZQQ2 1576 aa28.69■■■□□ 2.18
TRPT1-203ENST00000394547 TET3O43151 1660 aa28.69■■■□□ 2.18
TRPT1-203ENST00000394547 ZNF142P52746 1687 aaPredicted RBP28.68■■■□□ 2.18
TRPT1-203ENST00000394547 ERVK-7P63135 1459 aa28.65■■■□□ 2.18
TRPT1-203ENST00000394547 RPRD2Q5VT52 1461 aaKnown RBP28.63■■■□□ 2.17
TRPT1-203ENST00000394547 TNRQ92752 1358 aa28.62■■■□□ 2.17
TRPT1-203ENST00000394547 FBXO31Q5XUX0 539 aaPredicted RBP28.61■■■□□ 2.17
TRPT1-203ENST00000394547 CEP170BQ9Y4F5 1589 aaPredicted RBP28.61■■■□□ 2.17
TRPT1-203ENST00000394547 NUP155O75694 1391 aa28.61■■■□□ 2.17
TRPT1-203ENST00000394547 NLRP1Q9C000 1473 aa28.59■■■□□ 2.17
TRPT1-203ENST00000394547 A2ML1A8K2U0 1454 aa28.57■■■□□ 2.16
TRPT1-203ENST00000394547 ACIN1Q9UKV3 1341 aaKnown RBP28.55■■■□□ 2.16
TRPT1-203ENST00000394547 E9PCH4 1651 aa28.54■■■□□ 2.16
TRPT1-203ENST00000394547 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
TRPT1-203ENST00000394547 NOS1P29475 1434 aa28.52■■■□□ 2.16
TRPT1-203ENST00000394547 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
TRPT1-203ENST00000394547 SYNMO15061 1565 aa28.49■■■□□ 2.15
TRPT1-203ENST00000394547 HSPA2P54652 639 aa28.48■■■□□ 2.15
TRPT1-203ENST00000394547 UGGT1Q9NYU2 1555 aa28.46■■■□□ 2.15
TRPT1-203ENST00000394547 PLA2R1Q13018 1463 aa28.46■■■□□ 2.15
TRPT1-203ENST00000394547 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.15
TRPT1-203ENST00000394547 UBR1Q8IWV7 1749 aa28.43■■■□□ 2.14
TRPT1-203ENST00000394547 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
TRPT1-203ENST00000394547 STRCQ7RTU9 1775 aa28.42■■■□□ 2.14
TRPT1-203ENST00000394547 PIK3C2BO00750 1634 aa28.41■■■□□ 2.14
TRPT1-203ENST00000394547 SPHKAPQ2M3C7 1700 aa28.4■■■□□ 2.14
TRPT1-203ENST00000394547 RAB3GAP2Q9H2M9 1393 aa28.4■■■□□ 2.14
TRPT1-203ENST00000394547 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.14
TRPT1-203ENST00000394547 HRCP23327 699 aa28.37■■■□□ 2.13
TRPT1-203ENST00000394547 THEMISQ8N1K5 641 aaPredicted RBP28.37■■■□□ 2.13
TRPT1-203ENST00000394547 PTPRTO14522 1441 aa28.36■■■□□ 2.13
TRPT1-203ENST00000394547 ADGRB3O60242 1522 aa28.35■■■□□ 2.13
TRPT1-203ENST00000394547 SLC4A1APQ9BWU0 796 aaKnown RBP28.34■■■□□ 2.13
TRPT1-203ENST00000394547 POLR1AO95602 1720 aaPredicted RBP28.34■■■□□ 2.13
TRPT1-203ENST00000394547 TRPM2O94759 1503 aa28.33■■■□□ 2.13
TRPT1-203ENST00000394547 IDI1Q13907 227 aa28.32■■■□□ 2.12
TRPT1-203ENST00000394547 PKD2Q13563 968 aa28.31■■■□□ 2.12
TRPT1-203ENST00000394547 SLIT1O75093 1534 aa28.3■■■□□ 2.12
TRPT1-203ENST00000394547 DMRT2Q9Y5R5 561 aa28.3■■■□□ 2.12
TRPT1-203ENST00000394547 ARHGAP23Q9P227 1491 aa28.28■■■□□ 2.12
TRPT1-203ENST00000394547 TMEM131LA2VDJ0 1609 aa28.27■■■□□ 2.12
TRPT1-203ENST00000394547 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
TRPT1-203ENST00000394547 MPHOSPH9Q99550 1183 aa28.26■■■□□ 2.11
TRPT1-203ENST00000394547 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
TRPT1-203ENST00000394547 NEURL4Q96JN8 1562 aa28.24■■■□□ 2.11
TRPT1-203ENST00000394547 CLTCL1P53675 1640 aa28.23■■■□□ 2.11
TRPT1-203ENST00000394547 MED14O60244 1454 aa28.22■■■□□ 2.11
TRPT1-203ENST00000394547 ANKLE2Q86XL3 938 aa28.22■■■□□ 2.11
TRPT1-203ENST00000394547 MYO5BQ9ULV0 1848 aa28.22■■■□□ 2.11
TRPT1-203ENST00000394547 TMEM2Q9UHN6 1383 aa28.22■■■□□ 2.11
TRPT1-203ENST00000394547 NCKAP5LQ9HCH0 1330 aa28.2■■■□□ 2.11
TRPT1-203ENST00000394547 SCAF11Q99590 1463 aaKnown RBP28.19■■■□□ 2.1
TRPT1-203ENST00000394547 KIF1BO60333 1816 aa28.18■■■□□ 2.1
TRPT1-203ENST00000394547 IQGAP1P46940 1657 aa28.16■■■□□ 2.1
TRPT1-203ENST00000394547 EID1Q9Y6B2 187 aa28.14■■■□□ 2.1
TRPT1-203ENST00000394547 NPHP4O75161 1426 aaPredicted RBP28.14■■■□□ 2.1
TRPT1-203ENST00000394547 ZFYVE9O95405 1425 aa28.13■■■□□ 2.09
TRPT1-203ENST00000394547 CCDC144AA2RUR9 1427 aa28.11■■■□□ 2.09
TRPT1-203ENST00000394547 FOXD1Q16676 465 aa28.11■■■□□ 2.09
TRPT1-203ENST00000394547 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms