RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 GGT6Q6P531 493 aa25.06■■□□□ 1.6
TGFA-202ENST00000394241 CPS1P31327 1500 aa25.06■■□□□ 1.6
TGFA-202ENST00000394241 DNMT1P26358 1616 aaKnown RBP25.05■■□□□ 1.6
TGFA-202ENST00000394241 A2ML1A8K2U0 1454 aa25.05■■□□□ 1.6
TGFA-202ENST00000394241 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
TGFA-202ENST00000394241 CFDP1Q9UEE9 299 aaPredicted RBP25.04■■□□□ 1.6
TGFA-202ENST00000394241 MYOM3Q5VTT5 1437 aa25.03■■□□□ 1.6
TGFA-202ENST00000394241 KIAA1107Q9UPP5 1409 aa25.01■■□□□ 1.59
TGFA-202ENST00000394241 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
TGFA-202ENST00000394241 PLEKHH2Q8IVE3 1493 aa25■■□□□ 1.59
TGFA-202ENST00000394241 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
TGFA-202ENST00000394241 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
TGFA-202ENST00000394241 NEURL4Q96JN8 1562 aa24.99■■□□□ 1.59
TGFA-202ENST00000394241 CAMSAP2Q08AD1 1489 aa24.96■■□□□ 1.59
TGFA-202ENST00000394241 MIA2Q96PC5 1412 aa24.96■■□□□ 1.59
TGFA-202ENST00000394241 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
TGFA-202ENST00000394241 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
TGFA-202ENST00000394241 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
TGFA-202ENST00000394241 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
TGFA-202ENST00000394241 VWDEQ8N2E2 1590 aa24.9■■□□□ 1.58
TGFA-202ENST00000394241 TNRQ92752 1358 aa24.9■■□□□ 1.58
TGFA-202ENST00000394241 ZNF644Q9H582 1327 aaPredicted RBP24.88■■□□□ 1.57
TGFA-202ENST00000394241 ANKLE2Q86XL3 938 aa24.87■■□□□ 1.57
TGFA-202ENST00000394241 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
TGFA-202ENST00000394241 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
TGFA-202ENST00000394241 PZPP20742 1482 aa24.84■■□□□ 1.57
TGFA-202ENST00000394241 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
TGFA-202ENST00000394241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.84■■□□□ 1.57
TGFA-202ENST00000394241 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.56
TGFA-202ENST00000394241 DEPDC5O75140 1603 aa24.83■■□□□ 1.56
TGFA-202ENST00000394241 DHX29Q7Z478 1369 aaKnown RBP24.82■■□□□ 1.56
TGFA-202ENST00000394241 NPHP4O75161 1426 aaPredicted RBP24.82■■□□□ 1.56
TGFA-202ENST00000394241 MED14O60244 1454 aa24.82■■□□□ 1.56
TGFA-202ENST00000394241 KDM5DQ9BY66 1539 aa24.81■■□□□ 1.56
TGFA-202ENST00000394241 THEMISQ8N1K5 641 aaPredicted RBP24.81■■□□□ 1.56
TGFA-202ENST00000394241 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
TGFA-202ENST00000394241 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
TGFA-202ENST00000394241 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
TGFA-202ENST00000394241 UGGT1Q9NYU2 1555 aa24.79■■□□□ 1.56
TGFA-202ENST00000394241 IQGAP1P46940 1657 aa24.78■■□□□ 1.56
TGFA-202ENST00000394241 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
TGFA-202ENST00000394241 KIF3BO15066 747 aa24.77■■□□□ 1.56
TGFA-202ENST00000394241 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
TGFA-202ENST00000394241 RNF17Q9BXT8 1623 aaKnown RBP24.76■■□□□ 1.55
TGFA-202ENST00000394241 RSPH4AQ5TD94 716 aa24.76■■□□□ 1.55
TGFA-202ENST00000394241 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
TGFA-202ENST00000394241 LRRC7Q96NW7 1537 aa24.75■■□□□ 1.55
TGFA-202ENST00000394241 WASHC2CQ9Y4E1 1318 aa24.74■■□□□ 1.55
TGFA-202ENST00000394241 SYNMO15061 1565 aa24.74■■□□□ 1.55
TGFA-202ENST00000394241 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
TGFA-202ENST00000394241 MAST1Q9Y2H9 1570 aa24.71■■□□□ 1.55
TGFA-202ENST00000394241 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.55
TGFA-202ENST00000394241 RGS17Q9UGC6 210 aaPredicted RBP24.7■■□□□ 1.54
TGFA-202ENST00000394241 DAPK1P53355 1430 aa24.69■■□□□ 1.54
TGFA-202ENST00000394241 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
TGFA-202ENST00000394241 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
TGFA-202ENST00000394241 ABCC5O15440 1437 aa24.67■■□□□ 1.54
TGFA-202ENST00000394241 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
TGFA-202ENST00000394241 XIRP1Q702N8 1843 aaKnown RBP24.57■■□□□ 1.52
TGFA-202ENST00000394241 ABCC3O15438 1527 aa24.56■■□□□ 1.52
TGFA-202ENST00000394241 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
TGFA-202ENST00000394241 ADGRL2O95490 1459 aa24.55■■□□□ 1.52
TGFA-202ENST00000394241 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
TGFA-202ENST00000394241 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
TGFA-202ENST00000394241 POTEAQ6S8J7 498 aa24.53■■□□□ 1.52
TGFA-202ENST00000394241 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
TGFA-202ENST00000394241 CFAP65Q6ZU64 1925 aaKnown RBP24.51■■□□□ 1.51
TGFA-202ENST00000394241 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
TGFA-202ENST00000394241 KIF15Q9NS87 1388 aa24.51■■□□□ 1.51
TGFA-202ENST00000394241 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
TGFA-202ENST00000394241 ITGAEP38570 1179 aa24.5■■□□□ 1.51
TGFA-202ENST00000394241 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
TGFA-202ENST00000394241 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
TGFA-202ENST00000394241 SLIT1O75093 1534 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 ARHGAP23Q9P227 1491 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 LTKP29376 864 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 TXNDC2Q86VQ3 553 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 CEP152O94986 1710 aa24.46■■□□□ 1.51
TGFA-202ENST00000394241 RRP7BPQ9NSQ0 103 aa24.45■■□□□ 1.5
TGFA-202ENST00000394241 ERBINQ96RT1 1412 aa24.44■■□□□ 1.5
TGFA-202ENST00000394241 MROH1Q8NDA8 1641 aa24.43■■□□□ 1.5
TGFA-202ENST00000394241 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
TGFA-202ENST00000394241 ROBO1Q9Y6N7 1651 aa24.42■■□□□ 1.5
TGFA-202ENST00000394241 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
TGFA-202ENST00000394241 TMEM94Q12767 1356 aa24.39■■□□□ 1.49
TGFA-202ENST00000394241 GCC2Q8IWJ2 1684 aa24.37■■□□□ 1.49
TGFA-202ENST00000394241 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
TGFA-202ENST00000394241 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
TGFA-202ENST00000394241 TMEM2Q9UHN6 1383 aa24.32■■□□□ 1.48
TGFA-202ENST00000394241 ARHGAP31Q2M1Z3 1444 aa24.32■■□□□ 1.48
TGFA-202ENST00000394241 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
TGFA-202ENST00000394241 HFM1A2PYH4 1435 aa24.3■■□□□ 1.48
TGFA-202ENST00000394241 KCNA6P17658 529 aa24.3■■□□□ 1.48
TGFA-202ENST00000394241 PROSER2Q86WR7 435 aaPredicted RBP24.29■■□□□ 1.48
TGFA-202ENST00000394241 PHLPP1O60346 1717 aa24.29■■□□□ 1.48
TGFA-202ENST00000394241 NAIPQ13075 1403 aa24.28■■□□□ 1.48
TGFA-202ENST00000394241 RBM33Q96EV2 1170 aaKnown RBP24.27■■□□□ 1.48
TGFA-202ENST00000394241 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
TGFA-202ENST00000394241 KDM5AP29375 1690 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms