RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 GGT6Q6P531 493 aa25.3■■□□□ 1.64
ERCC2-202ENST00000391942 UNC13BO14795 1591 aa25.3■■□□□ 1.64
ERCC2-202ENST00000391942 RNF17Q9BXT8 1623 aaKnown RBP25.28■■□□□ 1.64
ERCC2-202ENST00000391942 HRCP23327 699 aa25.28■■□□□ 1.64
ERCC2-202ENST00000391942 MLECQ14165 292 aa25.28■■□□□ 1.64
ERCC2-202ENST00000391942 DEPDC5O75140 1603 aa25.28■■□□□ 1.64
ERCC2-202ENST00000391942 NUP155O75694 1391 aa25.26■■□□□ 1.63
ERCC2-202ENST00000391942 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
ERCC2-202ENST00000391942 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
ERCC2-202ENST00000391942 KANK1Q14678 1352 aa25.21■■□□□ 1.63
ERCC2-202ENST00000391942 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
ERCC2-202ENST00000391942 IQGAP3Q86VI3 1631 aa25.19■■□□□ 1.62
ERCC2-202ENST00000391942 PZPP20742 1482 aa25.19■■□□□ 1.62
ERCC2-202ENST00000391942 FAM135AQ9P2D6 1515 aa25.19■■□□□ 1.62
ERCC2-202ENST00000391942 CEP152O94986 1710 aa25.18■■□□□ 1.62
ERCC2-202ENST00000391942 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
ERCC2-202ENST00000391942 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
ERCC2-202ENST00000391942 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
ERCC2-202ENST00000391942 MPHOSPH9Q99550 1183 aa25.15■■□□□ 1.62
ERCC2-202ENST00000391942 WASHC2CQ9Y4E1 1318 aa25.15■■□□□ 1.62
ERCC2-202ENST00000391942 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.61
ERCC2-202ENST00000391942 ABCC3O15438 1527 aa25.14■■□□□ 1.61
ERCC2-202ENST00000391942 CLTCQ00610 1675 aaKnown RBP25.12■■□□□ 1.61
ERCC2-202ENST00000391942 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
ERCC2-202ENST00000391942 TET3O43151 1660 aa25.1■■□□□ 1.61
ERCC2-202ENST00000391942 PKD2Q13563 968 aa25.09■■□□□ 1.61
ERCC2-202ENST00000391942 FOXD1Q16676 465 aa25.09■■□□□ 1.61
ERCC2-202ENST00000391942 ESF1Q9H501 851 aaKnown RBP25.09■■□□□ 1.61
ERCC2-202ENST00000391942 CAMSAP1Q5T5Y3 1602 aa25.08■■□□□ 1.61
ERCC2-202ENST00000391942 LMTK2Q8IWU2 1503 aa25.08■■□□□ 1.61
ERCC2-202ENST00000391942 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.6
ERCC2-202ENST00000391942 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
ERCC2-202ENST00000391942 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
ERCC2-202ENST00000391942 E9PCH4 1651 aa25.05■■□□□ 1.6
ERCC2-202ENST00000391942 EFCAB6Q5THR3 1501 aa25.05■■□□□ 1.6
ERCC2-202ENST00000391942 MADDQ8WXG6 1647 aa25.04■■□□□ 1.6
ERCC2-202ENST00000391942 ADAMTSL3P82987 1691 aa25.03■■□□□ 1.6
ERCC2-202ENST00000391942 RIMS1Q86UR5 1692 aaKnown RBP25■■□□□ 1.59
ERCC2-202ENST00000391942 CNTLNQ9NXG0 1405 aa25■■□□□ 1.59
ERCC2-202ENST00000391942 CFAP65Q6ZU64 1925 aaKnown RBP24.99■■□□□ 1.59
ERCC2-202ENST00000391942 NPATQ14207 1427 aa24.99■■□□□ 1.59
ERCC2-202ENST00000391942 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
ERCC2-202ENST00000391942 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
ERCC2-202ENST00000391942 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
ERCC2-202ENST00000391942 ARHGAP31Q2M1Z3 1444 aa24.95■■□□□ 1.58
ERCC2-202ENST00000391942 RPRD2Q5VT52 1461 aaKnown RBP24.93■■□□□ 1.58
ERCC2-202ENST00000391942 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
ERCC2-202ENST00000391942 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
ERCC2-202ENST00000391942 C3P01024 1663 aa24.92■■□□□ 1.58
ERCC2-202ENST00000391942 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
ERCC2-202ENST00000391942 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
ERCC2-202ENST00000391942 PREX1Q8TCU6 1659 aa24.91■■□□□ 1.58
ERCC2-202ENST00000391942 PLA2R1Q13018 1463 aa24.9■■□□□ 1.58
ERCC2-202ENST00000391942 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
ERCC2-202ENST00000391942 PTPRTO14522 1441 aa24.87■■□□□ 1.57
ERCC2-202ENST00000391942 SIN3AQ96ST3 1273 aa24.87■■□□□ 1.57
ERCC2-202ENST00000391942 KDM4FA0A1W2PPD8 638 aa24.86■■□□□ 1.57
ERCC2-202ENST00000391942 TRPM2O94759 1503 aa24.85■■□□□ 1.57
ERCC2-202ENST00000391942 NOS1P29475 1434 aa24.85■■□□□ 1.57
ERCC2-202ENST00000391942 SYNMO15061 1565 aa24.85■■□□□ 1.57
ERCC2-202ENST00000391942 UGGT1Q9NYU2 1555 aa24.85■■□□□ 1.57
ERCC2-202ENST00000391942 NEUROD1Q13562 356 aa24.84■■□□□ 1.57
ERCC2-202ENST00000391942 PTPRMP28827 1452 aa24.84■■□□□ 1.57
ERCC2-202ENST00000391942 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
ERCC2-202ENST00000391942 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.57
ERCC2-202ENST00000391942 CCDC144AA2RUR9 1427 aa24.82■■□□□ 1.56
ERCC2-202ENST00000391942 CLTCL1P53675 1640 aa24.82■■□□□ 1.56
ERCC2-202ENST00000391942 TNRQ92752 1358 aa24.78■■□□□ 1.56
ERCC2-202ENST00000391942 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
ERCC2-202ENST00000391942 IDI1Q13907 227 aa24.74■■□□□ 1.55
ERCC2-202ENST00000391942 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
ERCC2-202ENST00000391942 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
ERCC2-202ENST00000391942 KIF1BO60333 1816 aa24.71■■□□□ 1.55
ERCC2-202ENST00000391942 MYO3AQ8NEV4 1616 aa24.69■■□□□ 1.54
ERCC2-202ENST00000391942 RGL3Q3MIN7 710 aa24.68■■□□□ 1.54
ERCC2-202ENST00000391942 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
ERCC2-202ENST00000391942 NLRP1Q9C000 1473 aa24.66■■□□□ 1.54
ERCC2-202ENST00000391942 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
ERCC2-202ENST00000391942 SPATA31E1Q6ZUB1 1445 aa24.65■■□□□ 1.54
ERCC2-202ENST00000391942 TONSLQ96HA7 1378 aa24.65■■□□□ 1.54
ERCC2-202ENST00000391942 ADGRB3O60242 1522 aa24.64■■□□□ 1.54
ERCC2-202ENST00000391942 TMEM131LA2VDJ0 1609 aa24.64■■□□□ 1.54
ERCC2-202ENST00000391942 ZNF326Q5BKZ1 582 aaKnown RBP24.62■■□□□ 1.53
ERCC2-202ENST00000391942 SETD1BQ9UPS6 1966 aaKnown RBP24.61■■□□□ 1.53
ERCC2-202ENST00000391942 UBR1Q8IWV7 1749 aa24.6■■□□□ 1.53
ERCC2-202ENST00000391942 CEP170BQ9Y4F5 1589 aaPredicted RBP24.6■■□□□ 1.53
ERCC2-202ENST00000391942 L3MBTL2Q969R5 705 aa24.6■■□□□ 1.53
ERCC2-202ENST00000391942 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
ERCC2-202ENST00000391942 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.53
ERCC2-202ENST00000391942 ZNF142P52746 1687 aaPredicted RBP24.57■■□□□ 1.52
ERCC2-202ENST00000391942 NEURL4Q96JN8 1562 aa24.57■■□□□ 1.52
ERCC2-202ENST00000391942 DCAF11Q8TEB1 546 aa24.56■■□□□ 1.52
ERCC2-202ENST00000391942 KDM5AP29375 1690 aaKnown RBP24.55■■□□□ 1.52
ERCC2-202ENST00000391942 KDM2AQ9Y2K7 1162 aa24.55■■□□□ 1.52
ERCC2-202ENST00000391942 NUTM2DQ5VT03 806 aaPredicted RBP24.53■■□□□ 1.52
ERCC2-202ENST00000391942 TIMELESSQ9UNS1 1208 aa24.51■■□□□ 1.51
ERCC2-202ENST00000391942 IFT172Q9UG01 1749 aa24.51■■□□□ 1.51
ERCC2-202ENST00000391942 PPLO60437 1756 aa24.51■■□□□ 1.51
ERCC2-202ENST00000391942 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
ERCC2-202ENST00000391942 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms