RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 STK25O00506 426 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 RAB11FIP3O75154 756 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 ERICH6BQ5W0A0 696 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 ZNF662Q6ZS27 426 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 APBB1IPQ7Z5R6 666 aaPredicted RBP4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 PLCD3Q8N3E9 789 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 MORC4Q8TE76 937 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 SECISBP2LQ93073 1101 aaKnown RBP4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 POM121Q96HA1 1249 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 MAGEC2Q9UBF1 373 aaPredicted RBP4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 STAG3Q9UJ98 1225 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 IVNS1ABPQ9Y6Y0 642 aa4.6□□□□□ -1.67
TRAJ17-201ENST00000390520 RTL5Q5HYW3 569 aaPredicted RBP4.59□□□□□ -1.67
TRAJ17-201ENST00000390520 SMC5Q8IY18 1101 aa4.59□□□□□ -1.67
TRAJ17-201ENST00000390520 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
TRAJ17-201ENST00000390520 NAP1L2Q9ULW6 460 aaPredicted RBP4.59□□□□□ -1.67
TRAJ17-201ENST00000390520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 OS9Q13438 667 aaPredicted RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 E2F4Q16254 413 aa4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 HNRNPUL2Q1KMD3 747 aaKnown RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 FOXD4L6Q3SYB3 417 aaPredicted RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 FOXD4L3Q6VB84 417 aaPredicted RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 CDCA7Q9BWT1 371 aaPredicted RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 KCNG1Q9UIX4 513 aa4.58□□□□□ -1.68
TRAJ17-201ENST00000390520 ZC3H6P61129 1189 aaKnown RBP4.57□□□□□ -1.68
TRAJ17-201ENST00000390520 SPINK5Q9NQ38 1064 aaPredicted RBP4.57□□□□□ -1.68
TRAJ17-201ENST00000390520 TBC1D12O60347 775 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 PPFIA4O75335 1185 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 EIF3JO75822 258 aaKnown RBP4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 SF3A1Q15459 793 aaKnown RBP4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 SKIV2LQ15477 1246 aaKnown RBP4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 GPIHBP1Q8IV16 184 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 FAM9BQ8IZU0 186 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 RBM46Q8TBY0 533 aaKnown RBP4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 EVI5LQ96CN4 794 aa4.56□□□□□ -1.68
TRAJ17-201ENST00000390520 VGFO15240 615 aaPredicted RBP4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 PHF14O94880 888 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 MAP4K4O95819 1239 aaPredicted RBP4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 MYBPC2Q14324 1141 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 TSHZ1Q6ZSZ6 1077 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 SGIP1Q9BQI5 828 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 MTA3Q9BTC8 594 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 ANP32EQ9BTT0 268 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 MAF1Q9H063 256 aa4.55□□□□□ -1.68
TRAJ17-201ENST00000390520 PEX14O75381 377 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 ZNF16P17020 682 aaPredicted RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 GLIPR1L2Q4G1C9 344 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 RBM26Q5T8P6 1007 aaKnown RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 KRBA2Q6ZNG9 492 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 NOP9Q86U38 636 aaKnown RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 FTSJ3Q8IY81 847 aaKnown RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 PBXIP1Q96AQ6 731 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 PCMTD1Q96MG8 357 aaPredicted RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 GNEQ9Y223 722 aaKnown RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 COG6Q9Y2V7 657 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 ZNF330Q9Y3S2 320 aaPredicted RBP4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 RPS6KL1Q9Y6S9 549 aa4.54□□□□□ -1.68
TRAJ17-201ENST00000390520 SBNO2Q9Y2G9 1366 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 EXOC5O00471 708 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 CREB3O43889 395 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 VAMP1P23763 118 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 ARID4AP29374 1257 aaPredicted RBP4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 FOSBP53539 338 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 CLEC4GQ6UXB4 293 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 DNAJC14Q6Y2X3 702 aaPredicted RBP4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 MAMSTRQ6ZN01 415 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 DPH6Q7L8W6 267 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 MIER1Q8N108 512 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 GPATCH3Q96I76 525 aa4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 PPP1R1BQ9UD71 204 aaPredicted RBP4.53□□□□□ -1.68
TRAJ17-201ENST00000390520 CCDC194A0A1B0GVG4 234 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 PARNO95453 639 aaKnown RBP4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 CSB-PGBD3P0DP91 1061 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 APLP1P51693 650 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 FAM193AP78312 1265 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 FOXD4Q12950 439 aaPredicted RBP4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 AMHR2Q16671 573 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 NAALADL2Q58DX5 795 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 CACTIN-AS1Q8N1I8 211 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 LARGE2Q8N3Y3 721 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 SDR16C5Q8N3Y7 309 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 KLHL42Q9P2K6 505 aa4.52□□□□□ -1.69
TRAJ17-201ENST00000390520 LIG1P18858 919 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 SRPK2P78362 688 aaKnown RBP4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 PSME1Q06323 249 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 GSE1Q14687 1217 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 ZFYVE27Q5T4F4 411 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 RINLQ6ZS11 566 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 PARP9Q8IXQ6 854 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 PMM1Q92871 262 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 ZBTB47Q9UFB7 747 aaPredicted RBP4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 STK24Q9Y6E0 443 aa4.51□□□□□ -1.69
TRAJ17-201ENST00000390520 TLDC2A0PJX2 215 aa4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 EGFLAMQ63HQ2 1017 aa4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 KCNB2Q92953 911 aa4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 JADE2Q9NQC1 790 aa4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.5□□□□□ -1.69
TRAJ17-201ENST00000390520 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms