RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ROCK1Q13464 1354 aa22.71■■□□□ 1.23
VCX3B-201ENST00000381029 GGT6Q6P531 493 aa22.7■■□□□ 1.22
VCX3B-201ENST00000381029 FAM135AQ9P2D6 1515 aa22.68■■□□□ 1.22
VCX3B-201ENST00000381029 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
VCX3B-201ENST00000381029 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
VCX3B-201ENST00000381029 ILDR1Q86SU0 546 aaPredicted RBP22.66■■□□□ 1.22
VCX3B-201ENST00000381029 ZMYM3Q14202 1370 aa22.65■■□□□ 1.22
VCX3B-201ENST00000381029 C3P01024 1663 aa22.65■■□□□ 1.22
VCX3B-201ENST00000381029 KDM5DQ9BY66 1539 aa22.65■■□□□ 1.22
VCX3B-201ENST00000381029 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.21
VCX3B-201ENST00000381029 DEPDC5O75140 1603 aa22.64■■□□□ 1.21
VCX3B-201ENST00000381029 PRDM15P57071 1507 aaPredicted RBP22.63■■□□□ 1.21
VCX3B-201ENST00000381029 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
VCX3B-201ENST00000381029 ABCC3O15438 1527 aa22.61■■□□□ 1.21
VCX3B-201ENST00000381029 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
VCX3B-201ENST00000381029 ITGAEP38570 1179 aa22.59■■□□□ 1.21
VCX3B-201ENST00000381029 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
VCX3B-201ENST00000381029 LMTK3Q96Q04 1460 aa22.59■■□□□ 1.21
VCX3B-201ENST00000381029 NPATQ14207 1427 aa22.58■■□□□ 1.21
VCX3B-201ENST00000381029 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
VCX3B-201ENST00000381029 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
VCX3B-201ENST00000381029 PZPP20742 1482 aa22.55■■□□□ 1.2
VCX3B-201ENST00000381029 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
VCX3B-201ENST00000381029 LMTK2Q8IWU2 1503 aa22.53■■□□□ 1.2
VCX3B-201ENST00000381029 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
VCX3B-201ENST00000381029 NAIPQ13075 1403 aa22.53■■□□□ 1.2
VCX3B-201ENST00000381029 CEP152O94986 1710 aa22.51■■□□□ 1.19
VCX3B-201ENST00000381029 UNC13BO14795 1591 aa22.5■■□□□ 1.19
VCX3B-201ENST00000381029 ARHGAP31Q2M1Z3 1444 aa22.5■■□□□ 1.19
VCX3B-201ENST00000381029 HFM1A2PYH4 1435 aa22.49■■□□□ 1.19
VCX3B-201ENST00000381029 PREX1Q8TCU6 1659 aa22.49■■□□□ 1.19
VCX3B-201ENST00000381029 FBXO31Q5XUX0 539 aaPredicted RBP22.49■■□□□ 1.19
VCX3B-201ENST00000381029 CAMSAP1Q5T5Y3 1602 aa22.48■■□□□ 1.19
VCX3B-201ENST00000381029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.19
VCX3B-201ENST00000381029 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
VCX3B-201ENST00000381029 GCC2Q8IWJ2 1684 aa22.46■■□□□ 1.19
VCX3B-201ENST00000381029 KANK1Q14678 1352 aa22.45■■□□□ 1.18
VCX3B-201ENST00000381029 SPATA31D1Q6ZQQ2 1576 aa22.45■■□□□ 1.18
VCX3B-201ENST00000381029 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
VCX3B-201ENST00000381029 EFCAB6Q5THR3 1501 aa22.42■■□□□ 1.18
VCX3B-201ENST00000381029 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
VCX3B-201ENST00000381029 TNRQ92752 1358 aa22.41■■□□□ 1.18
VCX3B-201ENST00000381029 HSPA2P54652 639 aa22.41■■□□□ 1.18
VCX3B-201ENST00000381029 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
VCX3B-201ENST00000381029 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.18
VCX3B-201ENST00000381029 CEP170BQ9Y4F5 1589 aaPredicted RBP22.38■■□□□ 1.17
VCX3B-201ENST00000381029 TET3O43151 1660 aa22.37■■□□□ 1.17
VCX3B-201ENST00000381029 NOS1P29475 1434 aa22.37■■□□□ 1.17
VCX3B-201ENST00000381029 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
VCX3B-201ENST00000381029 NUP155O75694 1391 aa22.36■■□□□ 1.17
VCX3B-201ENST00000381029 RPRD2Q5VT52 1461 aaKnown RBP22.35■■□□□ 1.17
VCX3B-201ENST00000381029 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
VCX3B-201ENST00000381029 SYNMO15061 1565 aa22.32■■□□□ 1.16
VCX3B-201ENST00000381029 E9PCH4 1651 aa22.3■■□□□ 1.16
VCX3B-201ENST00000381029 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
VCX3B-201ENST00000381029 CFAP65Q6ZU64 1925 aaKnown RBP22.28■■□□□ 1.16
VCX3B-201ENST00000381029 PLA2R1Q13018 1463 aa22.28■■□□□ 1.16
VCX3B-201ENST00000381029 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
VCX3B-201ENST00000381029 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
VCX3B-201ENST00000381029 PTPRTO14522 1441 aa22.23■■□□□ 1.15
VCX3B-201ENST00000381029 IDI1Q13907 227 aa22.22■■□□□ 1.15
VCX3B-201ENST00000381029 PIK3C2BO00750 1634 aa22.21■■□□□ 1.15
VCX3B-201ENST00000381029 UBR1Q8IWV7 1749 aa22.21■■□□□ 1.15
VCX3B-201ENST00000381029 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
VCX3B-201ENST00000381029 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
VCX3B-201ENST00000381029 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
VCX3B-201ENST00000381029 ARHGAP23Q9P227 1491 aa22.18■■□□□ 1.14
VCX3B-201ENST00000381029 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
VCX3B-201ENST00000381029 SLIT1O75093 1534 aa22.16■■□□□ 1.14
VCX3B-201ENST00000381029 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
VCX3B-201ENST00000381029 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
VCX3B-201ENST00000381029 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
VCX3B-201ENST00000381029 PKD2Q13563 968 aa22.15■■□□□ 1.14
VCX3B-201ENST00000381029 ADGRB3O60242 1522 aa22.15■■□□□ 1.14
VCX3B-201ENST00000381029 HRCP23327 699 aa22.14■■□□□ 1.13
VCX3B-201ENST00000381029 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
VCX3B-201ENST00000381029 ACIN1Q9UKV3 1341 aaKnown RBP22.12■■□□□ 1.13
VCX3B-201ENST00000381029 SPHKAPQ2M3C7 1700 aa22.12■■□□□ 1.13
VCX3B-201ENST00000381029 MED14O60244 1454 aa22.12■■□□□ 1.13
VCX3B-201ENST00000381029 TRPM2O94759 1503 aa22.11■■□□□ 1.13
VCX3B-201ENST00000381029 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
VCX3B-201ENST00000381029 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
VCX3B-201ENST00000381029 TMEM2Q9UHN6 1383 aa22.11■■□□□ 1.13
VCX3B-201ENST00000381029 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
VCX3B-201ENST00000381029 LTKP29376 864 aa22.09■■□□□ 1.13
VCX3B-201ENST00000381029 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
VCX3B-201ENST00000381029 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
VCX3B-201ENST00000381029 FBXO41Q8TF61 875 aa22.08■■□□□ 1.13
VCX3B-201ENST00000381029 ZFYVE9O95405 1425 aa22.07■■□□□ 1.12
VCX3B-201ENST00000381029 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
VCX3B-201ENST00000381029 SCAF11Q99590 1463 aaKnown RBP22.06■■□□□ 1.12
VCX3B-201ENST00000381029 FOXD1Q16676 465 aa22.05■■□□□ 1.12
VCX3B-201ENST00000381029 NPHP4O75161 1426 aaPredicted RBP22.03■■□□□ 1.12
VCX3B-201ENST00000381029 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
VCX3B-201ENST00000381029 STAG3Q9UJ98 1225 aa22.01■■□□□ 1.11
VCX3B-201ENST00000381029 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
VCX3B-201ENST00000381029 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
VCX3B-201ENST00000381029 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
VCX3B-201ENST00000381029 RIMS2Q9UQ26 1411 aa21.98■■□□□ 1.11
VCX3B-201ENST00000381029 IQGAP1P46940 1657 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms