RNA–Protein interactions for RNA: ENST00000380343.8

APH1B-203, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best) BASIC

Gene APH1B, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-203ENST00000380343 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
APH1B-203ENST00000380343 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
APH1B-203ENST00000380343 PLEKHH2Q8IVE3 1493 aa17.04■□□□□ 0.32
APH1B-203ENST00000380343 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.32
APH1B-203ENST00000380343 LRRC7Q96NW7 1537 aa17.02■□□□□ 0.32
APH1B-203ENST00000380343 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
APH1B-203ENST00000380343 POTEAQ6S8J7 498 aa17.02■□□□□ 0.32
APH1B-203ENST00000380343 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
APH1B-203ENST00000380343 CFDP1Q9UEE9 299 aaPredicted RBP17■□□□□ 0.31
APH1B-203ENST00000380343 DEPDC5O75140 1603 aa16.99■□□□□ 0.31
APH1B-203ENST00000380343 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
APH1B-203ENST00000380343 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
APH1B-203ENST00000380343 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
APH1B-203ENST00000380343 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
APH1B-203ENST00000380343 PZPP20742 1482 aa16.99■□□□□ 0.31
APH1B-203ENST00000380343 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
APH1B-203ENST00000380343 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
APH1B-203ENST00000380343 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
APH1B-203ENST00000380343 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
APH1B-203ENST00000380343 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.3
APH1B-203ENST00000380343 SYNMO15061 1565 aa16.95■□□□□ 0.3
APH1B-203ENST00000380343 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
APH1B-203ENST00000380343 IQGAP1P46940 1657 aa16.94■□□□□ 0.3
APH1B-203ENST00000380343 KIF3BO15066 747 aa16.94■□□□□ 0.3
APH1B-203ENST00000380343 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
APH1B-203ENST00000380343 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
APH1B-203ENST00000380343 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
APH1B-203ENST00000380343 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
APH1B-203ENST00000380343 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
APH1B-203ENST00000380343 ZNF644Q9H582 1327 aaPredicted RBP16.87■□□□□ 0.29
APH1B-203ENST00000380343 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
APH1B-203ENST00000380343 MBD5Q9P267 1494 aa16.86■□□□□ 0.29
APH1B-203ENST00000380343 UPF1Q92900 1129 aaKnown RBP eCLIP16.84■□□□□ 0.29
APH1B-203ENST00000380343 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
APH1B-203ENST00000380343 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
APH1B-203ENST00000380343 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
APH1B-203ENST00000380343 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
APH1B-203ENST00000380343 ZC3H13Q5T200 1668 aaKnown RBP16.8■□□□□ 0.28
APH1B-203ENST00000380343 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
APH1B-203ENST00000380343 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
APH1B-203ENST00000380343 LTKP29376 864 aa16.78■□□□□ 0.28
APH1B-203ENST00000380343 EID1Q9Y6B2 187 aa16.77■□□□□ 0.28
APH1B-203ENST00000380343 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
APH1B-203ENST00000380343 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
APH1B-203ENST00000380343 JCADQ9P266 1359 aa16.76■□□□□ 0.27
APH1B-203ENST00000380343 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
APH1B-203ENST00000380343 LRRC9Q6ZRR7 1453 aa16.74■□□□□ 0.27
APH1B-203ENST00000380343 ZNF772Q68DY9 489 aaPredicted RBP16.74■□□□□ 0.27
APH1B-203ENST00000380343 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
APH1B-203ENST00000380343 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
APH1B-203ENST00000380343 KCNA6P17658 529 aa16.73■□□□□ 0.27
APH1B-203ENST00000380343 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
APH1B-203ENST00000380343 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
APH1B-203ENST00000380343 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
APH1B-203ENST00000380343 SLIT1O75093 1534 aa16.72■□□□□ 0.27
APH1B-203ENST00000380343 NCOA2Q15596 1464 aa16.72■□□□□ 0.27
APH1B-203ENST00000380343 TIAM1Q13009 1591 aa16.72■□□□□ 0.27
APH1B-203ENST00000380343 ABCC3O15438 1527 aa16.71■□□□□ 0.27
APH1B-203ENST00000380343 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
APH1B-203ENST00000380343 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
APH1B-203ENST00000380343 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
APH1B-203ENST00000380343 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
APH1B-203ENST00000380343 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
APH1B-203ENST00000380343 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
APH1B-203ENST00000380343 RXRBP28702 533 aa16.68■□□□□ 0.26
APH1B-203ENST00000380343 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
APH1B-203ENST00000380343 MSH6P52701 1360 aa16.66■□□□□ 0.26
APH1B-203ENST00000380343 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
APH1B-203ENST00000380343 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
APH1B-203ENST00000380343 TMEM2Q9UHN6 1383 aa16.65■□□□□ 0.26
APH1B-203ENST00000380343 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
APH1B-203ENST00000380343 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
APH1B-203ENST00000380343 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
APH1B-203ENST00000380343 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
APH1B-203ENST00000380343 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
APH1B-203ENST00000380343 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
APH1B-203ENST00000380343 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
APH1B-203ENST00000380343 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
APH1B-203ENST00000380343 LRP6O75581 1613 aa16.61■□□□□ 0.25
APH1B-203ENST00000380343 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
APH1B-203ENST00000380343 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
APH1B-203ENST00000380343 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
APH1B-203ENST00000380343 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.24
APH1B-203ENST00000380343 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
APH1B-203ENST00000380343 TET3O43151 1660 aa16.57■□□□□ 0.24
APH1B-203ENST00000380343 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
APH1B-203ENST00000380343 CFAP65Q6ZU64 1925 aaKnown RBP16.56■□□□□ 0.24
APH1B-203ENST00000380343 FOXD1Q16676 465 aa16.55■□□□□ 0.24
APH1B-203ENST00000380343 BCANQ96GW7 911 aa16.55■□□□□ 0.24
APH1B-203ENST00000380343 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
APH1B-203ENST00000380343 PIK3C2BO00750 1634 aa16.54■□□□□ 0.24
APH1B-203ENST00000380343 NWD1Q149M9 1564 aa16.54■□□□□ 0.24
APH1B-203ENST00000380343 CEP152O94986 1710 aa16.53■□□□□ 0.24
APH1B-203ENST00000380343 IDI1Q13907 227 aa16.53■□□□□ 0.24
APH1B-203ENST00000380343 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.24
APH1B-203ENST00000380343 AFF2P51816 1311 aa16.51■□□□□ 0.23
APH1B-203ENST00000380343 KDM5AP29375 1690 aaKnown RBP16.51■□□□□ 0.23
APH1B-203ENST00000380343 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
APH1B-203ENST00000380343 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
APH1B-203ENST00000380343 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms