RNA–Protein interactions for RNA: ENST00000379716.5

SH3KBP1-203, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 2 BASIC

Gene SH3KBP1, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-203ENST00000379716 PLCD4Q9BRC7 762 aa12.48□□□□□ -0.41
SH3KBP1-203ENST00000379716 CASKIN1Q8WXD9 1431 aa12.48□□□□□ -0.41
SH3KBP1-203ENST00000379716 CTTNBP2Q8WZ74 1663 aa12.47□□□□□ -0.41
SH3KBP1-203ENST00000379716 PTMAP06454 111 aaKnown RBP12.47□□□□□ -0.41
SH3KBP1-203ENST00000379716 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
SH3KBP1-203ENST00000379716 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
SH3KBP1-203ENST00000379716 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.41
SH3KBP1-203ENST00000379716 E9PSI1 815 aa12.46□□□□□ -0.41
SH3KBP1-203ENST00000379716 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
SH3KBP1-203ENST00000379716 IRX3P78415 501 aaPredicted RBP12.46□□□□□ -0.41
SH3KBP1-203ENST00000379716 ZNF644Q9H582 1327 aaPredicted RBP12.46□□□□□ -0.42
SH3KBP1-203ENST00000379716 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.42
SH3KBP1-203ENST00000379716 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.42
SH3KBP1-203ENST00000379716 OS9Q13438 667 aaPredicted RBP12.45□□□□□ -0.42
SH3KBP1-203ENST00000379716 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
SH3KBP1-203ENST00000379716 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
SH3KBP1-203ENST00000379716 SOX12O15370 315 aa12.44□□□□□ -0.42
SH3KBP1-203ENST00000379716 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
SH3KBP1-203ENST00000379716 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
SH3KBP1-203ENST00000379716 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
SH3KBP1-203ENST00000379716 DNTTIP2Q5QJE6 756 aaKnown RBP12.42□□□□□ -0.42
SH3KBP1-203ENST00000379716 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
SH3KBP1-203ENST00000379716 PSMD1Q99460 953 aa12.41□□□□□ -0.42
SH3KBP1-203ENST00000379716 CLSTN1O94985 981 aa12.41□□□□□ -0.42
SH3KBP1-203ENST00000379716 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 RAPGEF3O95398 923 aa12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 TNNT2P45379 298 aaPredicted RBP12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 ATP10BO94823 1461 aa12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
SH3KBP1-203ENST00000379716 GSE1Q14687 1217 aa12.39□□□□□ -0.43
SH3KBP1-203ENST00000379716 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
SH3KBP1-203ENST00000379716 GGT6Q6P531 493 aa12.39□□□□□ -0.43
SH3KBP1-203ENST00000379716 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
SH3KBP1-203ENST00000379716 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
SH3KBP1-203ENST00000379716 CLGNO14967 610 aa12.38□□□□□ -0.43
SH3KBP1-203ENST00000379716 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
SH3KBP1-203ENST00000379716 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
SH3KBP1-203ENST00000379716 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
SH3KBP1-203ENST00000379716 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
SH3KBP1-203ENST00000379716 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
SH3KBP1-203ENST00000379716 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
SH3KBP1-203ENST00000379716 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
SH3KBP1-203ENST00000379716 CD109Q6YHK3 1445 aa12.35□□□□□ -0.43
SH3KBP1-203ENST00000379716 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
SH3KBP1-203ENST00000379716 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
SH3KBP1-203ENST00000379716 TMEM51Q9NW97 253 aa12.34□□□□□ -0.43
SH3KBP1-203ENST00000379716 WASHC2AQ641Q2 1341 aa12.34□□□□□ -0.43
SH3KBP1-203ENST00000379716 ABCC2Q92887 1545 aa12.33□□□□□ -0.43
SH3KBP1-203ENST00000379716 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
SH3KBP1-203ENST00000379716 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
SH3KBP1-203ENST00000379716 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
SH3KBP1-203ENST00000379716 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
SH3KBP1-203ENST00000379716 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
SH3KBP1-203ENST00000379716 KIF3BO15066 747 aa12.32□□□□□ -0.44
SH3KBP1-203ENST00000379716 IPO9Q96P70 1041 aaKnown RBP12.31□□□□□ -0.44
SH3KBP1-203ENST00000379716 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
SH3KBP1-203ENST00000379716 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
SH3KBP1-203ENST00000379716 ARID3AQ99856 593 aa12.29□□□□□ -0.44
SH3KBP1-203ENST00000379716 SAMD9Q5K651 1589 aa12.29□□□□□ -0.44
SH3KBP1-203ENST00000379716 DDRGK1Q96HY6 314 aa12.28□□□□□ -0.44
SH3KBP1-203ENST00000379716 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
SH3KBP1-203ENST00000379716 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
SH3KBP1-203ENST00000379716 WDR7Q9Y4E6 1490 aa12.28□□□□□ -0.44
SH3KBP1-203ENST00000379716 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
SH3KBP1-203ENST00000379716 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.44
SH3KBP1-203ENST00000379716 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.44
SH3KBP1-203ENST00000379716 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
SH3KBP1-203ENST00000379716 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
SH3KBP1-203ENST00000379716 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
SH3KBP1-203ENST00000379716 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
SH3KBP1-203ENST00000379716 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
SH3KBP1-203ENST00000379716 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
SH3KBP1-203ENST00000379716 RRAGDQ9NQL2 400 aaPredicted RBP12.24□□□□□ -0.45
SH3KBP1-203ENST00000379716 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
SH3KBP1-203ENST00000379716 ANKRD30AQ9BXX3 1397 aa12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 PRDM16Q9HAZ2 1276 aa12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 SLC52A1Q9NWF4 448 aa12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 MCCP23508 829 aa12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 ABCA8O94911 1581 aa12.22□□□□□ -0.45
SH3KBP1-203ENST00000379716 FANCAO15360 1455 aa12.21□□□□□ -0.45
SH3KBP1-203ENST00000379716 KIF14Q15058 1648 aa12.21□□□□□ -0.46
SH3KBP1-203ENST00000379716 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
SH3KBP1-203ENST00000379716 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
SH3KBP1-203ENST00000379716 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
SH3KBP1-203ENST00000379716 RGL3Q3MIN7 710 aa12.19□□□□□ -0.46
SH3KBP1-203ENST00000379716 PUS7Q96PZ0 661 aaKnown RBP12.19□□□□□ -0.46
SH3KBP1-203ENST00000379716 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
SH3KBP1-203ENST00000379716 SMAP1Q8IYB5 467 aaPredicted RBP12.18□□□□□ -0.46
SH3KBP1-203ENST00000379716 GPATCH11Q8N954 259 aa12.18□□□□□ -0.46
SH3KBP1-203ENST00000379716 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
SH3KBP1-203ENST00000379716 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
SH3KBP1-203ENST00000379716 AKNAQ7Z591 1439 aa12.17□□□□□ -0.46
SH3KBP1-203ENST00000379716 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms