RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
CBWD3-203ENST00000377344 UNC13BO14795 1591 aa19.09■□□□□ 0.65
CBWD3-203ENST00000377344 REREQ9P2R6 1566 aa19.09■□□□□ 0.65
CBWD3-203ENST00000377344 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
CBWD3-203ENST00000377344 ARID4BQ4LE39 1312 aaPredicted RBP19.07■□□□□ 0.64
CBWD3-203ENST00000377344 MPHOSPH9Q99550 1183 aa19.07■□□□□ 0.64
CBWD3-203ENST00000377344 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
CBWD3-203ENST00000377344 KANK1Q14678 1352 aa19.06■□□□□ 0.64
CBWD3-203ENST00000377344 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
CBWD3-203ENST00000377344 SIGLEC1Q9BZZ2 1709 aa19.05■□□□□ 0.64
CBWD3-203ENST00000377344 RNF17Q9BXT8 1623 aaKnown RBP19.04■□□□□ 0.64
CBWD3-203ENST00000377344 AGLP35573 1532 aa19.04■□□□□ 0.64
CBWD3-203ENST00000377344 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
CBWD3-203ENST00000377344 PZPP20742 1482 aa19.03■□□□□ 0.64
CBWD3-203ENST00000377344 MLECQ14165 292 aa19.03■□□□□ 0.64
CBWD3-203ENST00000377344 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
CBWD3-203ENST00000377344 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
CBWD3-203ENST00000377344 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
CBWD3-203ENST00000377344 IQGAP3Q86VI3 1631 aa19.02■□□□□ 0.63
CBWD3-203ENST00000377344 PKD2Q13563 968 aa19■□□□□ 0.63
CBWD3-203ENST00000377344 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
CBWD3-203ENST00000377344 FOXD1Q16676 465 aa18.99■□□□□ 0.63
CBWD3-203ENST00000377344 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
CBWD3-203ENST00000377344 CEP152O94986 1710 aa18.96■□□□□ 0.63
CBWD3-203ENST00000377344 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
CBWD3-203ENST00000377344 ABCC3O15438 1527 aa18.94■□□□□ 0.62
CBWD3-203ENST00000377344 TET3O43151 1660 aa18.93■□□□□ 0.62
CBWD3-203ENST00000377344 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
CBWD3-203ENST00000377344 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
CBWD3-203ENST00000377344 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
CBWD3-203ENST00000377344 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
CBWD3-203ENST00000377344 EFCAB6Q5THR3 1501 aa18.9■□□□□ 0.62
CBWD3-203ENST00000377344 E9PCH4 1651 aa18.89■□□□□ 0.62
CBWD3-203ENST00000377344 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
CBWD3-203ENST00000377344 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
CBWD3-203ENST00000377344 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
CBWD3-203ENST00000377344 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
CBWD3-203ENST00000377344 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
CBWD3-203ENST00000377344 NPATQ14207 1427 aa18.85■□□□□ 0.61
CBWD3-203ENST00000377344 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.6
CBWD3-203ENST00000377344 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
CBWD3-203ENST00000377344 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
CBWD3-203ENST00000377344 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
CBWD3-203ENST00000377344 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
CBWD3-203ENST00000377344 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
CBWD3-203ENST00000377344 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
CBWD3-203ENST00000377344 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
CBWD3-203ENST00000377344 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
CBWD3-203ENST00000377344 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
CBWD3-203ENST00000377344 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
CBWD3-203ENST00000377344 PTPRTO14522 1441 aa18.78■□□□□ 0.6
CBWD3-203ENST00000377344 TRPM2O94759 1503 aa18.77■□□□□ 0.6
CBWD3-203ENST00000377344 MROH2AA6NES4 1674 aa18.77■□□□□ 0.6
CBWD3-203ENST00000377344 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.6
CBWD3-203ENST00000377344 FBXO31Q5XUX0 539 aaPredicted RBP18.77■□□□□ 0.6
CBWD3-203ENST00000377344 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
CBWD3-203ENST00000377344 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
CBWD3-203ENST00000377344 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
CBWD3-203ENST00000377344 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-203ENST00000377344 NOS1P29475 1434 aa18.74■□□□□ 0.59
CBWD3-203ENST00000377344 ERVK-7P63135 1459 aa18.74■□□□□ 0.59
CBWD3-203ENST00000377344 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
CBWD3-203ENST00000377344 UGGT1Q9NYU2 1555 aa18.73■□□□□ 0.59
CBWD3-203ENST00000377344 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
CBWD3-203ENST00000377344 C3P01024 1663 aa18.72■□□□□ 0.59
CBWD3-203ENST00000377344 SYNMO15061 1565 aa18.71■□□□□ 0.59
CBWD3-203ENST00000377344 SPATA31D1Q6ZQQ2 1576 aa18.7■□□□□ 0.58
CBWD3-203ENST00000377344 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
CBWD3-203ENST00000377344 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
CBWD3-203ENST00000377344 SLC52A1Q9NWF4 448 aa18.67■□□□□ 0.58
CBWD3-203ENST00000377344 TNRQ92752 1358 aa18.67■□□□□ 0.58
CBWD3-203ENST00000377344 IDI1Q13907 227 aa18.67■□□□□ 0.58
CBWD3-203ENST00000377344 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
CBWD3-203ENST00000377344 KIF1BO60333 1816 aa18.65■□□□□ 0.58
CBWD3-203ENST00000377344 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
CBWD3-203ENST00000377344 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
CBWD3-203ENST00000377344 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
CBWD3-203ENST00000377344 PTPRMP28827 1452 aa18.63■□□□□ 0.57
CBWD3-203ENST00000377344 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
CBWD3-203ENST00000377344 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
CBWD3-203ENST00000377344 DCAF11Q8TEB1 546 aa18.61■□□□□ 0.57
CBWD3-203ENST00000377344 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
CBWD3-203ENST00000377344 KDM4FA0A1W2PPD8 638 aa18.6■□□□□ 0.57
CBWD3-203ENST00000377344 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
CBWD3-203ENST00000377344 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
CBWD3-203ENST00000377344 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
CBWD3-203ENST00000377344 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
CBWD3-203ENST00000377344 NEURL4Q96JN8 1562 aa18.56■□□□□ 0.56
CBWD3-203ENST00000377344 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
CBWD3-203ENST00000377344 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
CBWD3-203ENST00000377344 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
CBWD3-203ENST00000377344 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
CBWD3-203ENST00000377344 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-203ENST00000377344 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
CBWD3-203ENST00000377344 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
CBWD3-203ENST00000377344 CEP170BQ9Y4F5 1589 aaPredicted RBP18.49■□□□□ 0.55
CBWD3-203ENST00000377344 SETD1BQ9UPS6 1966 aaKnown RBP18.49■□□□□ 0.55
CBWD3-203ENST00000377344 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
CBWD3-203ENST00000377344 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
CBWD3-203ENST00000377344 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms