RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 FAM135AQ9P2D6 1515 aa20.22■□□□□ 0.83
HDAC8-205ENST00000373568 DEPDC5O75140 1603 aa20.21■□□□□ 0.83
HDAC8-205ENST00000373568 KIF3BO15066 747 aa20.2■□□□□ 0.82
HDAC8-205ENST00000373568 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
HDAC8-205ENST00000373568 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
HDAC8-205ENST00000373568 GGT6Q6P531 493 aa20.18■□□□□ 0.82
HDAC8-205ENST00000373568 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
HDAC8-205ENST00000373568 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
HDAC8-205ENST00000373568 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
HDAC8-205ENST00000373568 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
HDAC8-205ENST00000373568 ABCC3O15438 1527 aa20.14■□□□□ 0.81
HDAC8-205ENST00000373568 CEBPAP49715 358 aaPredicted RBP20.14■□□□□ 0.81
HDAC8-205ENST00000373568 CEP152O94986 1710 aa20.13■□□□□ 0.81
HDAC8-205ENST00000373568 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
HDAC8-205ENST00000373568 ANKRD50Q9ULJ7 1429 aa20.12■□□□□ 0.81
HDAC8-205ENST00000373568 PREX1Q8TCU6 1659 aa20.12■□□□□ 0.81
HDAC8-205ENST00000373568 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
HDAC8-205ENST00000373568 ESF1Q9H501 851 aaKnown RBP20.11■□□□□ 0.81
HDAC8-205ENST00000373568 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
HDAC8-205ENST00000373568 ITGAEP38570 1179 aa20.1■□□□□ 0.81
HDAC8-205ENST00000373568 CAMSAP1Q5T5Y3 1602 aa20.09■□□□□ 0.81
HDAC8-205ENST00000373568 UNC13BO14795 1591 aa20.09■□□□□ 0.81
HDAC8-205ENST00000373568 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
HDAC8-205ENST00000373568 GCC2Q8IWJ2 1684 aa20.09■□□□□ 0.81
HDAC8-205ENST00000373568 NPATQ14207 1427 aa20.09■□□□□ 0.81
HDAC8-205ENST00000373568 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.81
HDAC8-205ENST00000373568 PZPP20742 1482 aa20.07■□□□□ 0.8
HDAC8-205ENST00000373568 WASHC2CQ9Y4E1 1318 aa20.06■□□□□ 0.8
HDAC8-205ENST00000373568 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
HDAC8-205ENST00000373568 NAIPQ13075 1403 aa20.03■□□□□ 0.8
HDAC8-205ENST00000373568 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
HDAC8-205ENST00000373568 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
HDAC8-205ENST00000373568 ARHGAP31Q2M1Z3 1444 aa20.01■□□□□ 0.79
HDAC8-205ENST00000373568 ZNF142P52746 1687 aaPredicted RBP20■□□□□ 0.79
HDAC8-205ENST00000373568 SPATA31D1Q6ZQQ2 1576 aa20■□□□□ 0.79
HDAC8-205ENST00000373568 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
HDAC8-205ENST00000373568 IQGAP3Q86VI3 1631 aa19.99■□□□□ 0.79
HDAC8-205ENST00000373568 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
HDAC8-205ENST00000373568 KANK1Q14678 1352 aa19.98■□□□□ 0.79
HDAC8-205ENST00000373568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDAC8-205ENST00000373568 TET3O43151 1660 aa19.97■□□□□ 0.79
HDAC8-205ENST00000373568 FBXO31Q5XUX0 539 aaPredicted RBP19.97■□□□□ 0.79
HDAC8-205ENST00000373568 ERVK-7P63135 1459 aa19.97■□□□□ 0.79
HDAC8-205ENST00000373568 CEP170BQ9Y4F5 1589 aaPredicted RBP19.95■□□□□ 0.78
HDAC8-205ENST00000373568 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
HDAC8-205ENST00000373568 TNRQ92752 1358 aa19.94■□□□□ 0.78
HDAC8-205ENST00000373568 E9PCH4 1651 aa19.91■□□□□ 0.78
HDAC8-205ENST00000373568 HSPA2P54652 639 aa19.91■□□□□ 0.78
HDAC8-205ENST00000373568 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
HDAC8-205ENST00000373568 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
HDAC8-205ENST00000373568 SYNMO15061 1565 aa19.9■□□□□ 0.78
HDAC8-205ENST00000373568 NOS1P29475 1434 aa19.89■□□□□ 0.77
HDAC8-205ENST00000373568 STRCQ7RTU9 1775 aa19.89■□□□□ 0.77
HDAC8-205ENST00000373568 NLRP1Q9C000 1473 aa19.89■□□□□ 0.77
HDAC8-205ENST00000373568 NUP155O75694 1391 aa19.88■□□□□ 0.77
HDAC8-205ENST00000373568 ILDR1Q86SU0 546 aaPredicted RBP19.86■□□□□ 0.77
HDAC8-205ENST00000373568 UBR1Q8IWV7 1749 aa19.84■□□□□ 0.77
HDAC8-205ENST00000373568 PLA2R1Q13018 1463 aa19.83■□□□□ 0.76
HDAC8-205ENST00000373568 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
HDAC8-205ENST00000373568 UGGT1Q9NYU2 1555 aa19.82■□□□□ 0.76
HDAC8-205ENST00000373568 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
HDAC8-205ENST00000373568 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
HDAC8-205ENST00000373568 SPHKAPQ2M3C7 1700 aa19.79■□□□□ 0.76
HDAC8-205ENST00000373568 POLR1AO95602 1720 aaPredicted RBP19.77■□□□□ 0.76
HDAC8-205ENST00000373568 PTPRTO14522 1441 aa19.76■□□□□ 0.75
HDAC8-205ENST00000373568 NEURL4Q96JN8 1562 aa19.75■□□□□ 0.75
HDAC8-205ENST00000373568 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
HDAC8-205ENST00000373568 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
HDAC8-205ENST00000373568 IDI1Q13907 227 aa19.74■□□□□ 0.75
HDAC8-205ENST00000373568 ARHGAP23Q9P227 1491 aa19.73■□□□□ 0.75
HDAC8-205ENST00000373568 SLIT1O75093 1534 aa19.73■□□□□ 0.75
HDAC8-205ENST00000373568 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
HDAC8-205ENST00000373568 TRPM2O94759 1503 aa19.72■□□□□ 0.75
HDAC8-205ENST00000373568 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
HDAC8-205ENST00000373568 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
HDAC8-205ENST00000373568 TMEM131LA2VDJ0 1609 aa19.72■□□□□ 0.75
HDAC8-205ENST00000373568 THEMISQ8N1K5 641 aaPredicted RBP19.71■□□□□ 0.75
HDAC8-205ENST00000373568 NCKAP5LQ9HCH0 1330 aa19.69■□□□□ 0.74
HDAC8-205ENST00000373568 CLTCL1P53675 1640 aa19.69■□□□□ 0.74
HDAC8-205ENST00000373568 PKD2Q13563 968 aa19.68■□□□□ 0.74
HDAC8-205ENST00000373568 MED14O60244 1454 aa19.67■□□□□ 0.74
HDAC8-205ENST00000373568 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
HDAC8-205ENST00000373568 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
HDAC8-205ENST00000373568 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
HDAC8-205ENST00000373568 HRCP23327 699 aa19.65■□□□□ 0.74
HDAC8-205ENST00000373568 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
HDAC8-205ENST00000373568 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
HDAC8-205ENST00000373568 IQGAP1P46940 1657 aa19.64■□□□□ 0.73
HDAC8-205ENST00000373568 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
HDAC8-205ENST00000373568 ZFYVE9O95405 1425 aa19.62■□□□□ 0.73
HDAC8-205ENST00000373568 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
HDAC8-205ENST00000373568 LTKP29376 864 aa19.61■□□□□ 0.73
HDAC8-205ENST00000373568 NPHP4O75161 1426 aaPredicted RBP19.6■□□□□ 0.73
HDAC8-205ENST00000373568 KIF1BO60333 1816 aa19.6■□□□□ 0.73
HDAC8-205ENST00000373568 FOXD1Q16676 465 aa19.6■□□□□ 0.73
HDAC8-205ENST00000373568 STAG3Q9UJ98 1225 aa19.59■□□□□ 0.73
HDAC8-205ENST00000373568 LTBP4Q8N2S1 1624 aa19.58■□□□□ 0.72
HDAC8-205ENST00000373568 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
HDAC8-205ENST00000373568 RIMS2Q9UQ26 1411 aa19.56■□□□□ 0.72
HDAC8-205ENST00000373568 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms