RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 NUP155O75694 1391 aa25.24■■□□□ 1.63
UBE3D-203ENST00000369747 UNC13BO14795 1591 aa25.23■■□□□ 1.63
UBE3D-203ENST00000369747 ZNF316A6NFI3 1004 aaPredicted RBP25.22■■□□□ 1.63
UBE3D-203ENST00000369747 SIGLEC1Q9BZZ2 1709 aa25.22■■□□□ 1.63
UBE3D-203ENST00000369747 PZPP20742 1482 aa25.2■■□□□ 1.62
UBE3D-203ENST00000369747 MPHOSPH9Q99550 1183 aa25.2■■□□□ 1.62
UBE3D-203ENST00000369747 DEPDC5O75140 1603 aa25.19■■□□□ 1.62
UBE3D-203ENST00000369747 REREQ9P2R6 1566 aa25.19■■□□□ 1.62
UBE3D-203ENST00000369747 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
UBE3D-203ENST00000369747 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
UBE3D-203ENST00000369747 MROH1Q8NDA8 1641 aa25.17■■□□□ 1.62
UBE3D-203ENST00000369747 GGT6Q6P531 493 aa25.17■■□□□ 1.62
UBE3D-203ENST00000369747 KDM5DQ9BY66 1539 aa25.17■■□□□ 1.62
UBE3D-203ENST00000369747 BCORL1Q5H9F3 1711 aa25.17■■□□□ 1.62
UBE3D-203ENST00000369747 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
UBE3D-203ENST00000369747 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
UBE3D-203ENST00000369747 FAM135AQ9P2D6 1515 aa25.15■■□□□ 1.62
UBE3D-203ENST00000369747 PRDM15P57071 1507 aaPredicted RBP25.14■■□□□ 1.61
UBE3D-203ENST00000369747 IQGAP3Q86VI3 1631 aa25.13■■□□□ 1.61
UBE3D-203ENST00000369747 FOXD1Q16676 465 aa25.12■■□□□ 1.61
UBE3D-203ENST00000369747 AGLP35573 1532 aa25.12■■□□□ 1.61
UBE3D-203ENST00000369747 VWDEQ8N2E2 1590 aa25.09■■□□□ 1.61
UBE3D-203ENST00000369747 PKD2Q13563 968 aa25.09■■□□□ 1.61
UBE3D-203ENST00000369747 KANK1Q14678 1352 aa25.08■■□□□ 1.61
UBE3D-203ENST00000369747 ARID4BQ4LE39 1312 aaPredicted RBP25.08■■□□□ 1.61
UBE3D-203ENST00000369747 MLECQ14165 292 aa25.07■■□□□ 1.6
UBE3D-203ENST00000369747 CEP152O94986 1710 aa25.04■■□□□ 1.6
UBE3D-203ENST00000369747 WASHC2CQ9Y4E1 1318 aa25.03■■□□□ 1.6
UBE3D-203ENST00000369747 ABCC3O15438 1527 aa25.01■■□□□ 1.59
UBE3D-203ENST00000369747 TET3O43151 1660 aa25■■□□□ 1.59
UBE3D-203ENST00000369747 SIN3AQ96ST3 1273 aa24.98■■□□□ 1.59
UBE3D-203ENST00000369747 E9PCH4 1651 aa24.98■■□□□ 1.59
UBE3D-203ENST00000369747 LMTK2Q8IWU2 1503 aa24.98■■□□□ 1.59
UBE3D-203ENST00000369747 ANKRD30BQ9BXX2 1392 aa24.97■■□□□ 1.59
UBE3D-203ENST00000369747 EFCAB6Q5THR3 1501 aa24.96■■□□□ 1.59
UBE3D-203ENST00000369747 ZC3H13Q5T200 1668 aaKnown RBP24.94■■□□□ 1.58
UBE3D-203ENST00000369747 PPP6R1Q9UPN7 881 aa24.93■■□□□ 1.58
UBE3D-203ENST00000369747 CAMSAP1Q5T5Y3 1602 aa24.93■■□□□ 1.58
UBE3D-203ENST00000369747 NEUROD1Q13562 356 aa24.92■■□□□ 1.58
UBE3D-203ENST00000369747 CLTCQ00610 1675 aaKnown RBP24.92■■□□□ 1.58
UBE3D-203ENST00000369747 NPATQ14207 1427 aa24.91■■□□□ 1.58
UBE3D-203ENST00000369747 PLA2R1Q13018 1463 aa24.91■■□□□ 1.58
UBE3D-203ENST00000369747 CFAP65Q6ZU64 1925 aaKnown RBP24.89■■□□□ 1.57
UBE3D-203ENST00000369747 ESF1Q9H501 851 aaKnown RBP24.87■■□□□ 1.57
UBE3D-203ENST00000369747 TIMELESSQ9UNS1 1208 aa24.86■■□□□ 1.57
UBE3D-203ENST00000369747 RPRD2Q5VT52 1461 aaKnown RBP24.85■■□□□ 1.57
UBE3D-203ENST00000369747 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
UBE3D-203ENST00000369747 SPHKAPQ2M3C7 1700 aa24.84■■□□□ 1.57
UBE3D-203ENST00000369747 PTPRTO14522 1441 aa24.83■■□□□ 1.57
UBE3D-203ENST00000369747 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
UBE3D-203ENST00000369747 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
UBE3D-203ENST00000369747 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
UBE3D-203ENST00000369747 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
UBE3D-203ENST00000369747 TRPM2O94759 1503 aa24.8■■□□□ 1.56
UBE3D-203ENST00000369747 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
UBE3D-203ENST00000369747 UGGT1Q9NYU2 1555 aa24.78■■□□□ 1.56
UBE3D-203ENST00000369747 MADDQ8WXG6 1647 aa24.77■■□□□ 1.56
UBE3D-203ENST00000369747 NOS1P29475 1434 aa24.77■■□□□ 1.56
UBE3D-203ENST00000369747 PREX1Q8TCU6 1659 aa24.76■■□□□ 1.55
UBE3D-203ENST00000369747 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
UBE3D-203ENST00000369747 ADAMTSL3P82987 1691 aa24.75■■□□□ 1.55
UBE3D-203ENST00000369747 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
UBE3D-203ENST00000369747 SYNMO15061 1565 aa24.74■■□□□ 1.55
UBE3D-203ENST00000369747 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
UBE3D-203ENST00000369747 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
UBE3D-203ENST00000369747 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
UBE3D-203ENST00000369747 PPP1R15AO75807 674 aaPredicted RBP24.71■■□□□ 1.55
UBE3D-203ENST00000369747 PLPPR3Q6T4P5 718 aa24.71■■□□□ 1.55
UBE3D-203ENST00000369747 C3P01024 1663 aa24.7■■□□□ 1.55
UBE3D-203ENST00000369747 RIMS1Q86UR5 1692 aaKnown RBP24.7■■□□□ 1.55
UBE3D-203ENST00000369747 MIER1Q8N108 512 aa24.69■■□□□ 1.54
UBE3D-203ENST00000369747 SPATA31D1Q6ZQQ2 1576 aa24.69■■□□□ 1.54
UBE3D-203ENST00000369747 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
UBE3D-203ENST00000369747 RGL3Q3MIN7 710 aa24.67■■□□□ 1.54
UBE3D-203ENST00000369747 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
UBE3D-203ENST00000369747 IDI1Q13907 227 aa24.66■■□□□ 1.54
UBE3D-203ENST00000369747 SPATA31E1Q6ZUB1 1445 aa24.64■■□□□ 1.54
UBE3D-203ENST00000369747 SLC52A1Q9NWF4 448 aa24.63■■□□□ 1.53
UBE3D-203ENST00000369747 KIF1BO60333 1816 aa24.61■■□□□ 1.53
UBE3D-203ENST00000369747 CHGAP10645 457 aaKnown RBP24.61■■□□□ 1.53
UBE3D-203ENST00000369747 TNRQ92752 1358 aa24.6■■□□□ 1.53
UBE3D-203ENST00000369747 DCAF11Q8TEB1 546 aa24.57■■□□□ 1.52
UBE3D-203ENST00000369747 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
UBE3D-203ENST00000369747 PTPRMP28827 1452 aa24.56■■□□□ 1.52
UBE3D-203ENST00000369747 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
UBE3D-203ENST00000369747 KDM2AQ9Y2K7 1162 aa24.55■■□□□ 1.52
UBE3D-203ENST00000369747 NEURL4Q96JN8 1562 aa24.54■■□□□ 1.52
UBE3D-203ENST00000369747 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
UBE3D-203ENST00000369747 MYO5BQ9ULV0 1848 aa24.53■■□□□ 1.52
UBE3D-203ENST00000369747 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
UBE3D-203ENST00000369747 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
UBE3D-203ENST00000369747 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
UBE3D-203ENST00000369747 NLRP1Q9C000 1473 aa24.48■■□□□ 1.51
UBE3D-203ENST00000369747 A2ML1A8K2U0 1454 aa24.47■■□□□ 1.51
UBE3D-203ENST00000369747 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
UBE3D-203ENST00000369747 IFT172Q9UG01 1749 aa24.45■■□□□ 1.5
UBE3D-203ENST00000369747 NUTM2DQ5VT03 806 aaPredicted RBP24.44■■□□□ 1.5
UBE3D-203ENST00000369747 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
UBE3D-203ENST00000369747 CENPBP07199 599 aaPredicted RBP24.43■■□□□ 1.5
UBE3D-203ENST00000369747 PPLO60437 1756 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms