RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
EFNA1-201ENST00000368406 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
EFNA1-201ENST00000368406 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
EFNA1-201ENST00000368406 ZMYM3Q14202 1370 aa19.09■□□□□ 0.65
EFNA1-201ENST00000368406 PTPRKQ15262 1439 aa19.08■□□□□ 0.64
EFNA1-201ENST00000368406 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
EFNA1-201ENST00000368406 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
EFNA1-201ENST00000368406 C3P01024 1663 aa19.07■□□□□ 0.64
EFNA1-201ENST00000368406 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
EFNA1-201ENST00000368406 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
EFNA1-201ENST00000368406 ROCK1Q13464 1354 aa19.07■□□□□ 0.64
EFNA1-201ENST00000368406 CLTCQ00610 1675 aaKnown RBP19.06■□□□□ 0.64
EFNA1-201ENST00000368406 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
EFNA1-201ENST00000368406 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
EFNA1-201ENST00000368406 NPATQ14207 1427 aa19.04■□□□□ 0.64
EFNA1-201ENST00000368406 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
EFNA1-201ENST00000368406 LMTK3Q96Q04 1460 aa19.01■□□□□ 0.63
EFNA1-201ENST00000368406 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
EFNA1-201ENST00000368406 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
EFNA1-201ENST00000368406 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
EFNA1-201ENST00000368406 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
EFNA1-201ENST00000368406 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
EFNA1-201ENST00000368406 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
EFNA1-201ENST00000368406 ABCC3O15438 1527 aa18.98■□□□□ 0.63
EFNA1-201ENST00000368406 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
EFNA1-201ENST00000368406 PZPP20742 1482 aa18.96■□□□□ 0.63
EFNA1-201ENST00000368406 KANK1Q14678 1352 aa18.96■□□□□ 0.63
EFNA1-201ENST00000368406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.623e-18■■□□□ 11.6
EFNA1-201ENST00000368406 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
EFNA1-201ENST00000368406 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
EFNA1-201ENST00000368406 NAIPQ13075 1403 aa18.92■□□□□ 0.62
EFNA1-201ENST00000368406 ARHGAP31Q2M1Z3 1444 aa18.92■□□□□ 0.62
EFNA1-201ENST00000368406 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
EFNA1-201ENST00000368406 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
EFNA1-201ENST00000368406 CEP152O94986 1710 aa18.9■□□□□ 0.62
EFNA1-201ENST00000368406 HSPA2P54652 639 aa18.9■□□□□ 0.62
EFNA1-201ENST00000368406 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
EFNA1-201ENST00000368406 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
EFNA1-201ENST00000368406 TNRQ92752 1358 aa18.88■□□□□ 0.61
EFNA1-201ENST00000368406 SETD5Q9C0A6 1442 aa18.88■□□□□ 0.61
EFNA1-201ENST00000368406 UNC13BO14795 1591 aa18.87■□□□□ 0.61
EFNA1-201ENST00000368406 MYO3AQ8NEV4 1616 aa18.86■□□□□ 0.61
EFNA1-201ENST00000368406 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
EFNA1-201ENST00000368406 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
EFNA1-201ENST00000368406 ZNF142P52746 1687 aaPredicted RBP18.85■□□□□ 0.61
EFNA1-201ENST00000368406 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
EFNA1-201ENST00000368406 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
EFNA1-201ENST00000368406 A2ML1A8K2U0 1454 aa18.83■□□□□ 0.6
EFNA1-201ENST00000368406 CEP170BQ9Y4F5 1589 aaPredicted RBP18.82■□□□□ 0.6
EFNA1-201ENST00000368406 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
EFNA1-201ENST00000368406 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
EFNA1-201ENST00000368406 RPRD2Q5VT52 1461 aaKnown RBP18.81■□□□□ 0.6
EFNA1-201ENST00000368406 NUP155O75694 1391 aa18.81■□□□□ 0.6
EFNA1-201ENST00000368406 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
EFNA1-201ENST00000368406 TET3O43151 1660 aa18.8■□□□□ 0.6
EFNA1-201ENST00000368406 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
EFNA1-201ENST00000368406 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
EFNA1-201ENST00000368406 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
EFNA1-201ENST00000368406 STRCQ7RTU9 1775 aa18.77■□□□□ 0.59
EFNA1-201ENST00000368406 NOS1P29475 1434 aa18.77■□□□□ 0.59
EFNA1-201ENST00000368406 THEMISQ8N1K5 641 aaPredicted RBP18.76■□□□□ 0.59
EFNA1-201ENST00000368406 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
EFNA1-201ENST00000368406 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
EFNA1-201ENST00000368406 PKD2Q13563 968 aa18.74■□□□□ 0.59
EFNA1-201ENST00000368406 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
EFNA1-201ENST00000368406 E9PCH4 1651 aa18.71■□□□□ 0.59
EFNA1-201ENST00000368406 IDI1Q13907 227 aa18.71■□□□□ 0.59
EFNA1-201ENST00000368406 SYNMO15061 1565 aa18.7■□□□□ 0.58
EFNA1-201ENST00000368406 PTPRTO14522 1441 aa18.7■□□□□ 0.58
EFNA1-201ENST00000368406 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
EFNA1-201ENST00000368406 HRCP23327 699 aa18.68■□□□□ 0.58
EFNA1-201ENST00000368406 ANKLE2Q86XL3 938 aa18.68■□□□□ 0.58
EFNA1-201ENST00000368406 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
EFNA1-201ENST00000368406 UBR1Q8IWV7 1749 aa18.68■□□□□ 0.58
EFNA1-201ENST00000368406 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
EFNA1-201ENST00000368406 PIK3C2BO00750 1634 aa18.66■□□□□ 0.58
EFNA1-201ENST00000368406 STAG3Q9UJ98 1225 aa18.66■□□□□ 0.58
EFNA1-201ENST00000368406 SLIT1O75093 1534 aa18.63■□□□□ 0.57
EFNA1-201ENST00000368406 ARHGAP23Q9P227 1491 aa18.62■□□□□ 0.57
EFNA1-201ENST00000368406 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
EFNA1-201ENST00000368406 POLR1AO95602 1720 aaPredicted RBP18.62■□□□□ 0.57
EFNA1-201ENST00000368406 MED14O60244 1454 aa18.62■□□□□ 0.57
EFNA1-201ENST00000368406 MPHOSPH9Q99550 1183 aa18.61■□□□□ 0.57
EFNA1-201ENST00000368406 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
EFNA1-201ENST00000368406 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
EFNA1-201ENST00000368406 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
EFNA1-201ENST00000368406 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
EFNA1-201ENST00000368406 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.57
EFNA1-201ENST00000368406 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.56
EFNA1-201ENST00000368406 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
EFNA1-201ENST00000368406 LTKP29376 864 aa18.57■□□□□ 0.56
EFNA1-201ENST00000368406 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
EFNA1-201ENST00000368406 TRPM2O94759 1503 aa18.56■□□□□ 0.56
EFNA1-201ENST00000368406 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
EFNA1-201ENST00000368406 FOXD1Q16676 465 aa18.55■□□□□ 0.56
EFNA1-201ENST00000368406 IQGAP1P46940 1657 aa18.53■□□□□ 0.56
EFNA1-201ENST00000368406 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
EFNA1-201ENST00000368406 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
EFNA1-201ENST00000368406 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
EFNA1-201ENST00000368406 ZFYVE9O95405 1425 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms