RNA–Protein interactions for RNA: ENST00000364525.1

RN7SKP257-201, Transcript of RNA, 7SK small nuclear pseudogene 257, humanhuman

BASIC

Gene RN7SKP257, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP257-201ENST00000364525 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
RN7SKP257-201ENST00000364525 CLIP1P30622 1438 aa12.52□□□□□ -0.41
RN7SKP257-201ENST00000364525 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
RN7SKP257-201ENST00000364525 A2MP01023 1474 aa12.51□□□□□ -0.41
RN7SKP257-201ENST00000364525 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
RN7SKP257-201ENST00000364525 CDC42BPAQ5VT25 1732 aa12.49□□□□□ -0.41
RN7SKP257-201ENST00000364525 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
RN7SKP257-201ENST00000364525 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
RN7SKP257-201ENST00000364525 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP257-201ENST00000364525 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
RN7SKP257-201ENST00000364525 LRRIQ1Q96JM4 1722 aa12.48□□□□□ -0.41
RN7SKP257-201ENST00000364525 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
RN7SKP257-201ENST00000364525 HNRNPMP52272 730 aaKnown RBP eCLIP12.47□□□□□ -0.41
RN7SKP257-201ENST00000364525 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP257-201ENST00000364525 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
RN7SKP257-201ENST00000364525 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
RN7SKP257-201ENST00000364525 RXRBP28702 533 aa12.46□□□□□ -0.41
RN7SKP257-201ENST00000364525 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
RN7SKP257-201ENST00000364525 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
RN7SKP257-201ENST00000364525 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
RN7SKP257-201ENST00000364525 JCADQ9P266 1359 aa12.44□□□□□ -0.42
RN7SKP257-201ENST00000364525 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
RN7SKP257-201ENST00000364525 PZPP20742 1482 aa12.44□□□□□ -0.42
RN7SKP257-201ENST00000364525 NLRP1Q9C000 1473 aa12.44□□□□□ -0.42
RN7SKP257-201ENST00000364525 MIA2Q96PC5 1412 aa12.44□□□□□ -0.42
RN7SKP257-201ENST00000364525 LRP6O75581 1613 aa12.42□□□□□ -0.42
RN7SKP257-201ENST00000364525 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
RN7SKP257-201ENST00000364525 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
RN7SKP257-201ENST00000364525 SETBP1Q9Y6X0 1596 aa12.41□□□□□ -0.42
RN7SKP257-201ENST00000364525 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
RN7SKP257-201ENST00000364525 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
RN7SKP257-201ENST00000364525 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
RN7SKP257-201ENST00000364525 TMEM94Q12767 1356 aa12.39□□□□□ -0.43
RN7SKP257-201ENST00000364525 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP257-201ENST00000364525 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
RN7SKP257-201ENST00000364525 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
RN7SKP257-201ENST00000364525 KIF3BO15066 747 aa12.36□□□□□ -0.43
RN7SKP257-201ENST00000364525 SCAF11Q99590 1463 aaKnown RBP12.35□□□□□ -0.43
RN7SKP257-201ENST00000364525 FOXD1Q16676 465 aa12.35□□□□□ -0.43
RN7SKP257-201ENST00000364525 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 MAP3K1Q13233 1512 aa12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 LTKP29376 864 aa12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 TXNDC2Q86VQ3 553 aa12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
RN7SKP257-201ENST00000364525 RGS12O14924 1447 aa12.33□□□□□ -0.44
RN7SKP257-201ENST00000364525 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
RN7SKP257-201ENST00000364525 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
RN7SKP257-201ENST00000364525 DHX29Q7Z478 1369 aaKnown RBP12.32□□□□□ -0.44
RN7SKP257-201ENST00000364525 PLEKHH2Q8IVE3 1493 aa12.31□□□□□ -0.44
RN7SKP257-201ENST00000364525 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
RN7SKP257-201ENST00000364525 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
RN7SKP257-201ENST00000364525 AFF2P51816 1311 aa12.31□□□□□ -0.44
RN7SKP257-201ENST00000364525 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
RN7SKP257-201ENST00000364525 CFDP1Q9UEE9 299 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP257-201ENST00000364525 EP400Q96L91 3159 aa12.3□□□□□ -0.44
RN7SKP257-201ENST00000364525 MSH6P52701 1360 aa12.3□□□□□ -0.44
RN7SKP257-201ENST00000364525 KCNA6P17658 529 aa12.29□□□□□ -0.44
RN7SKP257-201ENST00000364525 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
RN7SKP257-201ENST00000364525 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
RN7SKP257-201ENST00000364525 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
RN7SKP257-201ENST00000364525 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
RN7SKP257-201ENST00000364525 TIAM1Q13009 1591 aa12.27□□□□□ -0.44
RN7SKP257-201ENST00000364525 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 ATAD2Q6PL18 1390 aa12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 SLIT1O75093 1534 aa12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP257-201ENST00000364525 ERVK-7P63135 1459 aa12.26□□□□□ -0.45
RN7SKP257-201ENST00000364525 SLC26A8Q96RN1 970 aa12.25□□□□□ -0.45
RN7SKP257-201ENST00000364525 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP257-201ENST00000364525 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
RN7SKP257-201ENST00000364525 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
RN7SKP257-201ENST00000364525 KDM5AP29375 1690 aaKnown RBP12.22□□□□□ -0.45
RN7SKP257-201ENST00000364525 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
RN7SKP257-201ENST00000364525 C8orf37Q96NL8 207 aa12.22□□□□□ -0.45
RN7SKP257-201ENST00000364525 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP257-201ENST00000364525 LRP5O75197 1615 aa12.21□□□□□ -0.46
RN7SKP257-201ENST00000364525 ABCC3O15438 1527 aa12.21□□□□□ -0.46
RN7SKP257-201ENST00000364525 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.46
RN7SKP257-201ENST00000364525 MBD5Q9P267 1494 aa12.21□□□□□ -0.46
RN7SKP257-201ENST00000364525 EEA1Q15075 1411 aa12.2□□□□□ -0.46
RN7SKP257-201ENST00000364525 NGLY1Q96IV0 654 aa12.2□□□□□ -0.46
RN7SKP257-201ENST00000364525 CEP152O94986 1710 aa12.2□□□□□ -0.46
RN7SKP257-201ENST00000364525 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
RN7SKP257-201ENST00000364525 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
RN7SKP257-201ENST00000364525 NWD1Q149M9 1564 aa12.19□□□□□ -0.46
RN7SKP257-201ENST00000364525 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
RN7SKP257-201ENST00000364525 TET3O43151 1660 aa12.18□□□□□ -0.46
RN7SKP257-201ENST00000364525 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
RN7SKP257-201ENST00000364525 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
RN7SKP257-201ENST00000364525 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
RN7SKP257-201ENST00000364525 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms