RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 NUP155O75694 1391 aa25.11■■□□□ 1.61
LMNA-202ENST00000361308 AGLP35573 1532 aa25.1■■□□□ 1.61
LMNA-202ENST00000361308 KANK1Q14678 1352 aa25.06■■□□□ 1.6
LMNA-202ENST00000361308 MLECQ14165 292 aa25.06■■□□□ 1.6
LMNA-202ENST00000361308 BCORL1Q5H9F3 1711 aa25.05■■□□□ 1.6
LMNA-202ENST00000361308 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
LMNA-202ENST00000361308 UNC13BO14795 1591 aa25.04■■□□□ 1.6
LMNA-202ENST00000361308 MPHOSPH9Q99550 1183 aa25.03■■□□□ 1.6
LMNA-202ENST00000361308 SIGLEC1Q9BZZ2 1709 aa25.03■■□□□ 1.6
LMNA-202ENST00000361308 DEPDC5O75140 1603 aa25.02■■□□□ 1.6
LMNA-202ENST00000361308 PPP6R1Q9UPN7 881 aa25.02■■□□□ 1.6
LMNA-202ENST00000361308 RNF17Q9BXT8 1623 aaKnown RBP25.02■■□□□ 1.6
LMNA-202ENST00000361308 WASHC2CQ9Y4E1 1318 aa25.01■■□□□ 1.59
LMNA-202ENST00000361308 PRDM15P57071 1507 aaPredicted RBP25■■□□□ 1.59
LMNA-202ENST00000361308 KDM5DQ9BY66 1539 aa24.99■■□□□ 1.59
LMNA-202ENST00000361308 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
LMNA-202ENST00000361308 DHX57Q6P158 1386 aaKnown RBP24.98■■□□□ 1.59
LMNA-202ENST00000361308 FAM135AQ9P2D6 1515 aa24.97■■□□□ 1.59
LMNA-202ENST00000361308 PZPP20742 1482 aa24.97■■□□□ 1.59
LMNA-202ENST00000361308 CCER1Q8TC90 406 aaPredicted RBP24.97■■□□□ 1.59
LMNA-202ENST00000361308 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
LMNA-202ENST00000361308 IQGAP3Q86VI3 1631 aa24.95■■□□□ 1.58
LMNA-202ENST00000361308 PKD2Q13563 968 aa24.95■■□□□ 1.58
LMNA-202ENST00000361308 VWDEQ8N2E2 1590 aa24.94■■□□□ 1.58
LMNA-202ENST00000361308 FOXD1Q16676 465 aa24.89■■□□□ 1.58
LMNA-202ENST00000361308 ABCC3O15438 1527 aa24.89■■□□□ 1.58
LMNA-202ENST00000361308 LMTK2Q8IWU2 1503 aa24.89■■□□□ 1.57
LMNA-202ENST00000361308 CEP152O94986 1710 aa24.85■■□□□ 1.57
LMNA-202ENST00000361308 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
LMNA-202ENST00000361308 TET3O43151 1660 aa24.85■■□□□ 1.57
LMNA-202ENST00000361308 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
LMNA-202ENST00000361308 EFCAB6Q5THR3 1501 aa24.81■■□□□ 1.56
LMNA-202ENST00000361308 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
LMNA-202ENST00000361308 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
LMNA-202ENST00000361308 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
LMNA-202ENST00000361308 ARHGAP31Q2M1Z3 1444 aa24.8■■□□□ 1.56
LMNA-202ENST00000361308 NPATQ14207 1427 aa24.79■■□□□ 1.56
LMNA-202ENST00000361308 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
LMNA-202ENST00000361308 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
LMNA-202ENST00000361308 E9PCH4 1651 aa24.78■■□□□ 1.56
LMNA-202ENST00000361308 ANKRD30BQ9BXX2 1392 aa24.77■■□□□ 1.56
LMNA-202ENST00000361308 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
LMNA-202ENST00000361308 ADAMTSL3P82987 1691 aa24.74■■□□□ 1.55
LMNA-202ENST00000361308 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
LMNA-202ENST00000361308 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
LMNA-202ENST00000361308 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
LMNA-202ENST00000361308 SIN3AQ96ST3 1273 aa24.72■■□□□ 1.55
LMNA-202ENST00000361308 PTPRTO14522 1441 aa24.71■■□□□ 1.55
LMNA-202ENST00000361308 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
LMNA-202ENST00000361308 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
LMNA-202ENST00000361308 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
LMNA-202ENST00000361308 MROH2AA6NES4 1674 aa24.7■■□□□ 1.54
LMNA-202ENST00000361308 CFAP65Q6ZU64 1925 aaKnown RBP24.69■■□□□ 1.54
LMNA-202ENST00000361308 CCDC144AA2RUR9 1427 aa24.67■■□□□ 1.54
LMNA-202ENST00000361308 NOS1P29475 1434 aa24.67■■□□□ 1.54
LMNA-202ENST00000361308 RIMS1Q86UR5 1692 aaKnown RBP24.67■■□□□ 1.54
LMNA-202ENST00000361308 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
LMNA-202ENST00000361308 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
LMNA-202ENST00000361308 TRPM2O94759 1503 aa24.64■■□□□ 1.53
LMNA-202ENST00000361308 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.53
LMNA-202ENST00000361308 KDM4FA0A1W2PPD8 638 aa24.63■■□□□ 1.53
LMNA-202ENST00000361308 PREX1Q8TCU6 1659 aa24.63■■□□□ 1.53
LMNA-202ENST00000361308 C3P01024 1663 aa24.62■■□□□ 1.53
LMNA-202ENST00000361308 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
LMNA-202ENST00000361308 PTPRMP28827 1452 aa24.6■■□□□ 1.53
LMNA-202ENST00000361308 TNRQ92752 1358 aa24.59■■□□□ 1.53
LMNA-202ENST00000361308 IDI1Q13907 227 aa24.59■■□□□ 1.53
LMNA-202ENST00000361308 SYNMO15061 1565 aa24.57■■□□□ 1.52
LMNA-202ENST00000361308 UGGT1Q9NYU2 1555 aa24.56■■□□□ 1.52
LMNA-202ENST00000361308 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
LMNA-202ENST00000361308 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
LMNA-202ENST00000361308 TIMELESSQ9UNS1 1208 aa24.53■■□□□ 1.52
LMNA-202ENST00000361308 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
LMNA-202ENST00000361308 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
LMNA-202ENST00000361308 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
LMNA-202ENST00000361308 ZEB1P37275 1124 aaPredicted RBP24.51■■□□□ 1.51
LMNA-202ENST00000361308 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
LMNA-202ENST00000361308 NLRP1Q9C000 1473 aa24.48■■□□□ 1.51
LMNA-202ENST00000361308 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
LMNA-202ENST00000361308 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
LMNA-202ENST00000361308 ZNF326Q5BKZ1 582 aaKnown RBP24.47■■□□□ 1.51
LMNA-202ENST00000361308 KIF1BO60333 1816 aa24.46■■□□□ 1.51
LMNA-202ENST00000361308 SETD1BQ9UPS6 1966 aaKnown RBP24.44■■□□□ 1.5
LMNA-202ENST00000361308 DCAF11Q8TEB1 546 aa24.43■■□□□ 1.5
LMNA-202ENST00000361308 NEURL4Q96JN8 1562 aa24.41■■□□□ 1.5
LMNA-202ENST00000361308 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
LMNA-202ENST00000361308 KDM2AQ9Y2K7 1162 aa24.4■■□□□ 1.5
LMNA-202ENST00000361308 TMEM131LA2VDJ0 1609 aa24.4■■□□□ 1.5
LMNA-202ENST00000361308 RPGRIP1LQ68CZ1 1315 aa24.4■■□□□ 1.5
LMNA-202ENST00000361308 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
LMNA-202ENST00000361308 MYO3AQ8NEV4 1616 aa24.38■■□□□ 1.49
LMNA-202ENST00000361308 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
LMNA-202ENST00000361308 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
LMNA-202ENST00000361308 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
LMNA-202ENST00000361308 STAC3Q96MF2 364 aa24.37■■□□□ 1.49
LMNA-202ENST00000361308 CEP170BQ9Y4F5 1589 aaPredicted RBP24.34■■□□□ 1.49
LMNA-202ENST00000361308 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
LMNA-202ENST00000361308 KDM5AP29375 1690 aaKnown RBP24.33■■□□□ 1.49
LMNA-202ENST00000361308 UBR1Q8IWV7 1749 aa24.33■■□□□ 1.48
LMNA-202ENST00000361308 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms