RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
RAB5C-201ENST00000346213 UHRF1BP1Q6BDS2 1440 aa24.96■■□□□ 1.59
RAB5C-201ENST00000346213 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
RAB5C-201ENST00000346213 RRP7BPQ9NSQ0 103 aa24.96■■□□□ 1.59
RAB5C-201ENST00000346213 EIF2AK4Q9P2K8 1649 aaKnown RBP24.95■■□□□ 1.59
RAB5C-201ENST00000346213 NPATQ14207 1427 aa24.95■■□□□ 1.58
RAB5C-201ENST00000346213 ABCC3O15438 1527 aa24.93■■□□□ 1.58
RAB5C-201ENST00000346213 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
RAB5C-201ENST00000346213 FBXO31Q5XUX0 539 aaPredicted RBP24.92■■□□□ 1.58
RAB5C-201ENST00000346213 ADGRL2O95490 1459 aa24.92■■□□□ 1.58
RAB5C-201ENST00000346213 MYO3AQ8NEV4 1616 aa24.92■■□□□ 1.58
RAB5C-201ENST00000346213 STRCQ7RTU9 1775 aa24.92■■□□□ 1.58
RAB5C-201ENST00000346213 NCOA1Q15788 1441 aa24.91■■□□□ 1.58
RAB5C-201ENST00000346213 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
RAB5C-201ENST00000346213 ERBINQ96RT1 1412 aa24.89■■□□□ 1.57
RAB5C-201ENST00000346213 PZPP20742 1482 aa24.88■■□□□ 1.57
RAB5C-201ENST00000346213 PRDM15P57071 1507 aaPredicted RBP24.88■■□□□ 1.57
RAB5C-201ENST00000346213 FAM135AQ9P2D6 1515 aa24.88■■□□□ 1.57
RAB5C-201ENST00000346213 CEP152O94986 1710 aa24.86■■□□□ 1.57
RAB5C-201ENST00000346213 WASHC2CQ9Y4E1 1318 aa24.86■■□□□ 1.57
RAB5C-201ENST00000346213 DEPDC5O75140 1603 aa24.86■■□□□ 1.57
RAB5C-201ENST00000346213 SETD1BQ9UPS6 1966 aaKnown RBP24.86■■□□□ 1.57
RAB5C-201ENST00000346213 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
RAB5C-201ENST00000346213 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
RAB5C-201ENST00000346213 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
RAB5C-201ENST00000346213 ZC3H13Q5T200 1668 aaKnown RBP24.81■■□□□ 1.56
RAB5C-201ENST00000346213 CAMSAP1Q5T5Y3 1602 aa24.8■■□□□ 1.56
RAB5C-201ENST00000346213 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
RAB5C-201ENST00000346213 TNRQ92752 1358 aa24.78■■□□□ 1.56
RAB5C-201ENST00000346213 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
RAB5C-201ENST00000346213 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
RAB5C-201ENST00000346213 ERVK-7P63135 1459 aa24.76■■□□□ 1.55
RAB5C-201ENST00000346213 A2ML1A8K2U0 1454 aa24.75■■□□□ 1.55
RAB5C-201ENST00000346213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.558e-8■■□□□ 12.7
RAB5C-201ENST00000346213 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
RAB5C-201ENST00000346213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
RAB5C-201ENST00000346213 ITGAEP38570 1179 aa24.72■■□□□ 1.55
RAB5C-201ENST00000346213 LMTK2Q8IWU2 1503 aa24.71■■□□□ 1.55
RAB5C-201ENST00000346213 NCKAP5LQ9HCH0 1330 aa24.71■■□□□ 1.55
RAB5C-201ENST00000346213 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
RAB5C-201ENST00000346213 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
RAB5C-201ENST00000346213 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
RAB5C-201ENST00000346213 ILDR1Q86SU0 546 aaPredicted RBP24.66■■□□□ 1.54
RAB5C-201ENST00000346213 PTPRTO14522 1441 aa24.65■■□□□ 1.54
RAB5C-201ENST00000346213 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
RAB5C-201ENST00000346213 UNC13BO14795 1591 aa24.65■■□□□ 1.54
RAB5C-201ENST00000346213 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
RAB5C-201ENST00000346213 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
RAB5C-201ENST00000346213 SYNMO15061 1565 aa24.63■■□□□ 1.53
RAB5C-201ENST00000346213 UGGT1Q9NYU2 1555 aa24.62■■□□□ 1.53
RAB5C-201ENST00000346213 CFAP65Q6ZU64 1925 aaKnown RBP24.61■■□□□ 1.53
RAB5C-201ENST00000346213 LTBP4Q8N2S1 1624 aa24.59■■□□□ 1.53
RAB5C-201ENST00000346213 KANK1Q14678 1352 aa24.58■■□□□ 1.53
RAB5C-201ENST00000346213 UBR1Q8IWV7 1749 aa24.58■■□□□ 1.52
RAB5C-201ENST00000346213 NOS1P29475 1434 aa24.57■■□□□ 1.52
RAB5C-201ENST00000346213 PIK3C2BO00750 1634 aa24.55■■□□□ 1.52
RAB5C-201ENST00000346213 NAIPQ13075 1403 aa24.55■■□□□ 1.52
RAB5C-201ENST00000346213 TET3O43151 1660 aa24.54■■□□□ 1.52
RAB5C-201ENST00000346213 POLR1AO95602 1720 aaPredicted RBP24.54■■□□□ 1.52
RAB5C-201ENST00000346213 IQGAP3Q86VI3 1631 aa24.53■■□□□ 1.52
RAB5C-201ENST00000346213 DMRT2Q9Y5R5 561 aa24.53■■□□□ 1.52
RAB5C-201ENST00000346213 ZNF335Q9H4Z2 1342 aaPredicted RBP24.52■■□□□ 1.52
RAB5C-201ENST00000346213 E9PCH4 1651 aa24.52■■□□□ 1.52
RAB5C-201ENST00000346213 PKD2Q13563 968 aa24.51■■□□□ 1.51
RAB5C-201ENST00000346213 CERKQ8TCT0 537 aa24.5■■□□□ 1.51
RAB5C-201ENST00000346213 IDI1Q13907 227 aa24.49■■□□□ 1.51
RAB5C-201ENST00000346213 GCC2Q8IWJ2 1684 aa24.49■■□□□ 1.51
RAB5C-201ENST00000346213 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
RAB5C-201ENST00000346213 THEMISQ8N1K5 641 aaPredicted RBP24.46■■□□□ 1.51
RAB5C-201ENST00000346213 MED14O60244 1454 aa24.46■■□□□ 1.51
RAB5C-201ENST00000346213 SLIT1O75093 1534 aa24.46■■□□□ 1.51
RAB5C-201ENST00000346213 NUP155O75694 1391 aa24.46■■□□□ 1.51
RAB5C-201ENST00000346213 LTKP29376 864 aa24.46■■□□□ 1.51
RAB5C-201ENST00000346213 RPRD2Q5VT52 1461 aaKnown RBP24.46■■□□□ 1.51
RAB5C-201ENST00000346213 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
RAB5C-201ENST00000346213 FBXO41Q8TF61 875 aa24.43■■□□□ 1.5
RAB5C-201ENST00000346213 NPHP4O75161 1426 aaPredicted RBP24.43■■□□□ 1.5
RAB5C-201ENST00000346213 ADGRB3O60242 1522 aa24.42■■□□□ 1.5
RAB5C-201ENST00000346213 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
RAB5C-201ENST00000346213 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
RAB5C-201ENST00000346213 SCAF11Q99590 1463 aaKnown RBP24.39■■□□□ 1.5
RAB5C-201ENST00000346213 TMEM2Q9UHN6 1383 aa24.39■■□□□ 1.49
RAB5C-201ENST00000346213 KDM5AP29375 1690 aaKnown RBP24.37■■□□□ 1.49
RAB5C-201ENST00000346213 STRCP1A6NGW2 1772 aa24.36■■□□□ 1.49
RAB5C-201ENST00000346213 TMEM131LA2VDJ0 1609 aa24.36■■□□□ 1.49
RAB5C-201ENST00000346213 MYO5BQ9ULV0 1848 aa24.35■■□□□ 1.49
RAB5C-201ENST00000346213 ZFYVE9O95405 1425 aa24.33■■□□□ 1.49
RAB5C-201ENST00000346213 TXNDC2Q86VQ3 553 aa24.32■■□□□ 1.48
RAB5C-201ENST00000346213 SLC52A1Q9NWF4 448 aa24.3■■□□□ 1.48
RAB5C-201ENST00000346213 SPHKAPQ2M3C7 1700 aa24.28■■□□□ 1.48
RAB5C-201ENST00000346213 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
RAB5C-201ENST00000346213 STAG3Q9UJ98 1225 aa24.26■■□□□ 1.47
RAB5C-201ENST00000346213 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
RAB5C-201ENST00000346213 IQSEC2Q5JU85 1478 aa24.25■■□□□ 1.47
RAB5C-201ENST00000346213 RIMS2Q9UQ26 1411 aa24.24■■□□□ 1.47
RAB5C-201ENST00000346213 ALKQ9UM73 1620 aa24.24■■□□□ 1.47
RAB5C-201ENST00000346213 TRPM2O94759 1503 aa24.22■■□□□ 1.47
RAB5C-201ENST00000346213 CPS1P31327 1500 aa24.22■■□□□ 1.47
RAB5C-201ENST00000346213 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
RAB5C-201ENST00000346213 FOXD1Q16676 465 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms