RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 EIF2AK4Q9P2K8 1649 aaKnown RBP21.76■■□□□ 1.07
CSRP1-201ENST00000340006 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
CSRP1-201ENST00000340006 KANK1Q14678 1352 aa21.74■■□□□ 1.07
CSRP1-201ENST00000340006 REREQ9P2R6 1566 aa21.74■■□□□ 1.07
CSRP1-201ENST00000340006 MPHOSPH9Q99550 1183 aa21.72■■□□□ 1.07
CSRP1-201ENST00000340006 WASHC2CQ9Y4E1 1318 aa21.72■■□□□ 1.07
CSRP1-201ENST00000340006 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
CSRP1-201ENST00000340006 ESF1Q9H501 851 aaKnown RBP21.71■■□□□ 1.07
CSRP1-201ENST00000340006 AGLP35573 1532 aa21.7■■□□□ 1.06
CSRP1-201ENST00000340006 SIGLEC1Q9BZZ2 1709 aa21.7■■□□□ 1.06
CSRP1-201ENST00000340006 BCORL1Q5H9F3 1711 aa21.68■■□□□ 1.06
CSRP1-201ENST00000340006 UNC13BO14795 1591 aa21.68■■□□□ 1.06
CSRP1-201ENST00000340006 DEPDC5O75140 1603 aa21.66■■□□□ 1.06
CSRP1-201ENST00000340006 RNF17Q9BXT8 1623 aaKnown RBP21.66■■□□□ 1.06
CSRP1-201ENST00000340006 PKD2Q13563 968 aa21.65■■□□□ 1.06
CSRP1-201ENST00000340006 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
CSRP1-201ENST00000340006 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.05
CSRP1-201ENST00000340006 FAM135AQ9P2D6 1515 aa21.64■■□□□ 1.05
CSRP1-201ENST00000340006 FOXD1Q16676 465 aa21.63■■□□□ 1.05
CSRP1-201ENST00000340006 PRDM15P57071 1507 aaPredicted RBP21.62■■□□□ 1.05
CSRP1-201ENST00000340006 MROH1Q8NDA8 1641 aa21.62■■□□□ 1.05
CSRP1-201ENST00000340006 PZPP20742 1482 aa21.62■■□□□ 1.05
CSRP1-201ENST00000340006 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
CSRP1-201ENST00000340006 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
CSRP1-201ENST00000340006 CEP152O94986 1710 aa21.59■■□□□ 1.05
CSRP1-201ENST00000340006 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.05
CSRP1-201ENST00000340006 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
CSRP1-201ENST00000340006 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
CSRP1-201ENST00000340006 ABCC3O15438 1527 aa21.55■■□□□ 1.04
CSRP1-201ENST00000340006 TET3O43151 1660 aa21.54■■□□□ 1.04
CSRP1-201ENST00000340006 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
CSRP1-201ENST00000340006 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
CSRP1-201ENST00000340006 LMTK2Q8IWU2 1503 aa21.51■■□□□ 1.03
CSRP1-201ENST00000340006 ZMYM3Q14202 1370 aa21.51■■□□□ 1.03
CSRP1-201ENST00000340006 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
CSRP1-201ENST00000340006 E9PCH4 1651 aa21.5■■□□□ 1.03
CSRP1-201ENST00000340006 FER1L4A9Z1Z3 1794 aa21.5■■□□□ 1.03
CSRP1-201ENST00000340006 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
CSRP1-201ENST00000340006 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
CSRP1-201ENST00000340006 EFCAB6Q5THR3 1501 aa21.48■■□□□ 1.03
CSRP1-201ENST00000340006 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
CSRP1-201ENST00000340006 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
CSRP1-201ENST00000340006 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
CSRP1-201ENST00000340006 CLSPNQ9HAW4 1339 aa21.47■■□□□ 1.03
CSRP1-201ENST00000340006 CEBPAP49715 358 aaPredicted RBP21.47■■□□□ 1.03
CSRP1-201ENST00000340006 NPATQ14207 1427 aa21.46■■□□□ 1.03
CSRP1-201ENST00000340006 ANKRD30BQ9BXX2 1392 aa21.45■■□□□ 1.03
CSRP1-201ENST00000340006 ARHGAP31Q2M1Z3 1444 aa21.44■■□□□ 1.02
CSRP1-201ENST00000340006 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
CSRP1-201ENST00000340006 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
CSRP1-201ENST00000340006 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
CSRP1-201ENST00000340006 ZEB1P37275 1124 aaPredicted RBP21.43■■□□□ 1.02
CSRP1-201ENST00000340006 RIMS1Q86UR5 1692 aaKnown RBP21.42■■□□□ 1.02
CSRP1-201ENST00000340006 MROH2AA6NES4 1674 aa21.41■■□□□ 1.02
CSRP1-201ENST00000340006 SPHKAPQ2M3C7 1700 aa21.4■■□□□ 1.02
CSRP1-201ENST00000340006 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
CSRP1-201ENST00000340006 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
CSRP1-201ENST00000340006 C3P01024 1663 aa21.38■■□□□ 1.01
CSRP1-201ENST00000340006 PTPRTO14522 1441 aa21.37■■□□□ 1.01
CSRP1-201ENST00000340006 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
CSRP1-201ENST00000340006 CHGAP10645 457 aaKnown RBP21.36■■□□□ 1.01
CSRP1-201ENST00000340006 KDM4FA0A1W2PPD8 638 aa21.35■■□□□ 1.01
CSRP1-201ENST00000340006 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
CSRP1-201ENST00000340006 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
CSRP1-201ENST00000340006 NOS1P29475 1434 aa21.34■■□□□ 1.01
CSRP1-201ENST00000340006 IDI1Q13907 227 aa21.34■■□□□ 1.01
CSRP1-201ENST00000340006 TRPM2O94759 1503 aa21.33■■□□□ 1.01
CSRP1-201ENST00000340006 RGL3Q3MIN7 710 aa21.33■■□□□ 1.01
CSRP1-201ENST00000340006 STAG3Q9UJ98 1225 aa21.33■■□□□ 1.01
CSRP1-201ENST00000340006 TNRQ92752 1358 aa21.3■■□□□ 1
CSRP1-201ENST00000340006 PTPRMP28827 1452 aa21.3■■□□□ 1
CSRP1-201ENST00000340006 UGGT1Q9NYU2 1555 aa21.3■■□□□ 1
CSRP1-201ENST00000340006 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
CSRP1-201ENST00000340006 TONSLQ96HA7 1378 aa21.29■■□□□ 1
CSRP1-201ENST00000340006 SYNMO15061 1565 aa21.29■■□□□ 1
CSRP1-201ENST00000340006 CLTCL1P53675 1640 aa21.28■■□□□ 1
CSRP1-201ENST00000340006 KIF1BO60333 1816 aa21.28■■□□□ 1
CSRP1-201ENST00000340006 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
CSRP1-201ENST00000340006 SETD1BQ9UPS6 1966 aaKnown RBP21.25■□□□□ 0.99
CSRP1-201ENST00000340006 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
CSRP1-201ENST00000340006 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
CSRP1-201ENST00000340006 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
CSRP1-201ENST00000340006 DCAF11Q8TEB1 546 aa21.23■□□□□ 0.99
CSRP1-201ENST00000340006 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
CSRP1-201ENST00000340006 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
CSRP1-201ENST00000340006 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
CSRP1-201ENST00000340006 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
CSRP1-201ENST00000340006 THEMISQ8N1K5 641 aaPredicted RBP21.16■□□□□ 0.98
CSRP1-201ENST00000340006 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
CSRP1-201ENST00000340006 TMEM131LA2VDJ0 1609 aa21.15■□□□□ 0.98
CSRP1-201ENST00000340006 PPP1R15AO75807 674 aaPredicted RBP21.14■□□□□ 0.98
CSRP1-201ENST00000340006 RPGRIP1LQ68CZ1 1315 aa21.13■□□□□ 0.97
CSRP1-201ENST00000340006 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
CSRP1-201ENST00000340006 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
CSRP1-201ENST00000340006 ADGRB3O60242 1522 aa21.12■□□□□ 0.97
CSRP1-201ENST00000340006 UHRF1BP1Q6BDS2 1440 aa21.12■□□□□ 0.97
CSRP1-201ENST00000340006 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
CSRP1-201ENST00000340006 UBR1Q8IWV7 1749 aa21.1■□□□□ 0.97
CSRP1-201ENST00000340006 VGFO15240 615 aaPredicted RBP21.1■□□□□ 0.97
CSRP1-201ENST00000340006 STAC3Q96MF2 364 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms