RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 CHADLQ6NUI6 762 aa9.39□□□□□ -0.91
ZNF28-201ENST00000339844 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
ZNF28-201ENST00000339844 DENND4BO75064 1496 aaPredicted RBP9.39□□□□□ -0.91
ZNF28-201ENST00000339844 ARHGEF12Q9NZN5 1544 aa9.38□□□□□ -0.91
ZNF28-201ENST00000339844 SUPT6HQ7KZ85 1726 aaKnown RBP9.38□□□□□ -0.91
ZNF28-201ENST00000339844 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
ZNF28-201ENST00000339844 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
ZNF28-201ENST00000339844 MYT1Q01538 1121 aa9.37□□□□□ -0.91
ZNF28-201ENST00000339844 CFDP1Q9UEE9 299 aaPredicted RBP9.37□□□□□ -0.91
ZNF28-201ENST00000339844 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
ZNF28-201ENST00000339844 POGZQ7Z3K3 1410 aa9.37□□□□□ -0.91
ZNF28-201ENST00000339844 SAMD9LQ8IVG5 1584 aa9.37□□□□□ -0.91
ZNF28-201ENST00000339844 RICTORQ6R327 1708 aa9.36□□□□□ -0.91
ZNF28-201ENST00000339844 ABCC1P33527 1531 aa9.36□□□□□ -0.91
ZNF28-201ENST00000339844 ZNF644Q9H582 1327 aaPredicted RBP9.36□□□□□ -0.91
ZNF28-201ENST00000339844 AFAP1Q8N556 730 aa9.36□□□□□ -0.91
ZNF28-201ENST00000339844 TRAPPC8Q9Y2L5 1435 aa9.36□□□□□ -0.91
ZNF28-201ENST00000339844 NUBP1P53384 320 aa9.35□□□□□ -0.91
ZNF28-201ENST00000339844 CLSPNQ9HAW4 1339 aa9.34□□□□□ -0.91
ZNF28-201ENST00000339844 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
ZNF28-201ENST00000339844 MNX1P50219 401 aaPredicted RBP9.34□□□□□ -0.91
ZNF28-201ENST00000339844 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZNF28-201ENST00000339844 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
ZNF28-201ENST00000339844 SYCP2Q9BX26 1530 aa9.34□□□□□ -0.91
ZNF28-201ENST00000339844 ITSN2Q9NZM3 1697 aa9.33□□□□□ -0.92
ZNF28-201ENST00000339844 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
ZNF28-201ENST00000339844 ZNF518AQ6AHZ1 1483 aa9.33□□□□□ -0.92
ZNF28-201ENST00000339844 KDM5CP41229 1560 aa9.33□□□□□ -0.92
ZNF28-201ENST00000339844 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
ZNF28-201ENST00000339844 KIAA1107Q9UPP5 1409 aa9.32□□□□□ -0.92
ZNF28-201ENST00000339844 MBD5Q9P267 1494 aa9.32□□□□□ -0.92
ZNF28-201ENST00000339844 ARHGEF40Q8TER5 1519 aa9.31□□□□□ -0.92
ZNF28-201ENST00000339844 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
ZNF28-201ENST00000339844 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
ZNF28-201ENST00000339844 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
ZNF28-201ENST00000339844 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
ZNF28-201ENST00000339844 MAGI2Q86UL8 1455 aa9.3□□□□□ -0.92
ZNF28-201ENST00000339844 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
ZNF28-201ENST00000339844 MIA2Q96PC5 1412 aa9.3□□□□□ -0.92
ZNF28-201ENST00000339844 MLH3Q9UHC1 1453 aa9.29□□□□□ -0.92
ZNF28-201ENST00000339844 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
ZNF28-201ENST00000339844 HECW2Q9P2P5 1572 aa9.29□□□□□ -0.92
ZNF28-201ENST00000339844 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
ZNF28-201ENST00000339844 NEUROD1Q13562 356 aa9.28□□□□□ -0.92
ZNF28-201ENST00000339844 MYT1LQ9UL68 1186 aa9.28□□□□□ -0.92
ZNF28-201ENST00000339844 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
ZNF28-201ENST00000339844 SPAG9O60271 1321 aaKnown RBP9.28□□□□□ -0.92
ZNF28-201ENST00000339844 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
ZNF28-201ENST00000339844 KIDINS220Q9ULH0 1771 aa9.27□□□□□ -0.92
ZNF28-201ENST00000339844 RGL2O15211 777 aa9.27□□□□□ -0.93
ZNF28-201ENST00000339844 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
ZNF28-201ENST00000339844 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
ZNF28-201ENST00000339844 DIP2CQ9Y2E4 1556 aa9.27□□□□□ -0.93
ZNF28-201ENST00000339844 ATP10AO60312 1499 aa9.27□□□□□ -0.93
ZNF28-201ENST00000339844 CCDC141Q6ZP82 1450 aa9.27□□□□□ -0.93
ZNF28-201ENST00000339844 INO80Q9ULG1 1556 aaPredicted RBP9.26□□□□□ -0.93
ZNF28-201ENST00000339844 C9orf84Q5VXU9 1444 aa9.26□□□□□ -0.93
ZNF28-201ENST00000339844 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
ZNF28-201ENST00000339844 TCOF1Q13428 1488 aaKnown RBP9.26□□□□□ -0.93
ZNF28-201ENST00000339844 ATP7AQ04656 1500 aa9.26□□□□□ -0.93
ZNF28-201ENST00000339844 ARHGEF5Q12774 1597 aa9.25□□□□□ -0.93
ZNF28-201ENST00000339844 SLC24A1O60721 1099 aa9.25□□□□□ -0.93
ZNF28-201ENST00000339844 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
ZNF28-201ENST00000339844 ARID4BQ4LE39 1312 aaPredicted RBP9.25□□□□□ -0.93
ZNF28-201ENST00000339844 EVX2Q03828 476 aa9.24□□□□□ -0.93
ZNF28-201ENST00000339844 ABCC5O15440 1437 aa9.23□□□□□ -0.93
ZNF28-201ENST00000339844 MLECQ14165 292 aa9.23□□□□□ -0.93
ZNF28-201ENST00000339844 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
ZNF28-201ENST00000339844 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
ZNF28-201ENST00000339844 RTEL1-TNFRSF6BF6WH68 1400 aa9.22□□□□□ -0.93
ZNF28-201ENST00000339844 REREQ9P2R6 1566 aa9.22□□□□□ -0.93
ZNF28-201ENST00000339844 FAM50AQ14320 339 aaKnown RBP9.22□□□□□ -0.93
ZNF28-201ENST00000339844 BCORL1Q5H9F3 1711 aa9.22□□□□□ -0.93
ZNF28-201ENST00000339844 DAPK1P53355 1430 aa9.22□□□□□ -0.93
ZNF28-201ENST00000339844 ADAMTSL3P82987 1691 aa9.21□□□□□ -0.93
ZNF28-201ENST00000339844 TSPY4P0CV99 314 aa9.21□□□□□ -0.94
ZNF28-201ENST00000339844 TSPY10P0CW01 314 aa9.21□□□□□ -0.94
ZNF28-201ENST00000339844 PYGBP11216 843 aa9.21□□□□□ -0.94
ZNF28-201ENST00000339844 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
ZNF28-201ENST00000339844 A2MP01023 1474 aa9.21□□□□□ -0.94
ZNF28-201ENST00000339844 AGLP35573 1532 aa9.21□□□□□ -0.94
ZNF28-201ENST00000339844 PLXNC1O60486 1568 aa9.2□□□□□ -0.94
ZNF28-201ENST00000339844 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
ZNF28-201ENST00000339844 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
ZNF28-201ENST00000339844 LHX8Q68G74 356 aa9.2□□□□□ -0.94
ZNF28-201ENST00000339844 MADDQ8WXG6 1647 aa9.2□□□□□ -0.94
ZNF28-201ENST00000339844 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
ZNF28-201ENST00000339844 CHGAP10645 457 aaKnown RBP9.19□□□□□ -0.94
ZNF28-201ENST00000339844 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
ZNF28-201ENST00000339844 PTPRKQ15262 1439 aa9.19□□□□□ -0.94
ZNF28-201ENST00000339844 SHANK2Q9UPX8 1470 aa9.19□□□□□ -0.94
ZNF28-201ENST00000339844 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
ZNF28-201ENST00000339844 ADGBQ8N7X0 1667 aa9.19□□□□□ -0.94
ZNF28-201ENST00000339844 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
ZNF28-201ENST00000339844 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
ZNF28-201ENST00000339844 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
ZNF28-201ENST00000339844 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
ZNF28-201ENST00000339844 PTPRMP28827 1452 aa9.16□□□□□ -0.94
ZNF28-201ENST00000339844 KIF15Q9NS87 1388 aa9.16□□□□□ -0.94
ZNF28-201ENST00000339844 RRP7BPQ9NSQ0 103 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms