RNA–Protein interactions for RNA: ENST00000334060.8_PAR_Y

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060_PAR_Y EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y UNC13BO14795 1591 aa24.6■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y FOXD1Q16676 465 aa24.6■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y PZPP20742 1482 aa24.59■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y DEPDC5O75140 1603 aa24.59■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y NUP155O75694 1391 aa24.59■■□□□ 1.53
SHOX-201ENST00000334060_PAR_Y RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y AGLP35573 1532 aa24.56■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y BCORL1Q5H9F3 1711 aa24.56■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y PRDM15P57071 1507 aaPredicted RBP24.55■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y CEP152O94986 1710 aa24.54■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y FAM135AQ9P2D6 1515 aa24.53■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y VWDEQ8N2E2 1590 aa24.52■■□□□ 1.52
SHOX-201ENST00000334060_PAR_Y MPHOSPH9Q99550 1183 aa24.49■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y IQGAP3Q86VI3 1631 aa24.49■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y ABCC3O15438 1527 aa24.48■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y HRCP23327 699 aa24.47■■□□□ 1.51
SHOX-201ENST00000334060_PAR_Y CLTCQ00610 1675 aaKnown RBP24.45■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y WASHC2CQ9Y4E1 1318 aa24.45■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y PKD2Q13563 968 aa24.45■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y E9PCH4 1651 aa24.41■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.5
SHOX-201ENST00000334060_PAR_Y KANK1Q14678 1352 aa24.38■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y NPATQ14207 1427 aa24.38■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y FBXO31Q5XUX0 539 aaPredicted RBP24.38■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y CFAP65Q6ZU64 1925 aaKnown RBP24.38■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y EFCAB6Q5THR3 1501 aa24.37■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y TET3O43151 1660 aa24.37■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y ADAMTSL3P82987 1691 aa24.36■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y LMTK2Q8IWU2 1503 aa24.36■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y PLA2R1Q13018 1463 aa24.35■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
SHOX-201ENST00000334060_PAR_Y ZC3H13Q5T200 1668 aaKnown RBP24.32■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y KDM4FA0A1W2PPD8 638 aa24.32■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y C3P01024 1663 aa24.27■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y ESF1Q9H501 851 aaKnown RBP24.27■■□□□ 1.48
SHOX-201ENST00000334060_PAR_Y SYNMO15061 1565 aa24.25■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y PREX1Q8TCU6 1659 aa24.24■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y NEUROD1Q13562 356 aa24.23■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y SPHKAPQ2M3C7 1700 aa24.23■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y ARHGAP31Q2M1Z3 1444 aa24.23■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y ERVK-7P63135 1459 aa24.22■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y PTPRTO14522 1441 aa24.21■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y MROH2AA6NES4 1674 aa24.21■■□□□ 1.47
SHOX-201ENST00000334060_PAR_Y NOS1P29475 1434 aa24.2■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y CLTCL1P53675 1640 aa24.2■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y PTPRMP28827 1452 aa24.19■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y CNTLNQ9NXG0 1405 aa24.19■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y TRPM2O94759 1503 aa24.17■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y RPRD2Q5VT52 1461 aaKnown RBP24.17■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y SPATA31D1Q6ZQQ2 1576 aa24.16■■□□□ 1.46
SHOX-201ENST00000334060_PAR_Y ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y IDI1Q13907 227 aa24.13■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y TNRQ92752 1358 aa24.09■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
SHOX-201ENST00000334060_PAR_Y CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y MYO3AQ8NEV4 1616 aa24.03■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y SPATA31E1Q6ZUB1 1445 aa24.03■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
SHOX-201ENST00000334060_PAR_Y CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y L3MBTL2Q969R5 705 aa24■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y ADGRB3O60242 1522 aa23.99■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y SLC52A1Q9NWF4 448 aa23.96■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y KIF1BO60333 1816 aa23.96■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y A2ML1A8K2U0 1454 aa23.96■■□□□ 1.43
SHOX-201ENST00000334060_PAR_Y UBR1Q8IWV7 1749 aa23.95■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y KDM2AQ9Y2K7 1162 aa23.94■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y ZNF326Q5BKZ1 582 aaKnown RBP23.92■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y DCAF11Q8TEB1 546 aa23.91■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y HSPA2P54652 639 aa23.89■■□□□ 1.42
SHOX-201ENST00000334060_PAR_Y NEXMIFQ5QGS0 1516 aa23.88■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y NBPF8Q3BBV2 869 aa23.87■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y ZNF142P52746 1687 aaPredicted RBP23.86■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y UHRF1BP1Q6BDS2 1440 aa23.86■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y IFT172Q9UG01 1749 aa23.85■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y LTKP29376 864 aa23.85■■□□□ 1.41
SHOX-201ENST00000334060_PAR_Y PPLO60437 1756 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms