RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
MRPL40-201ENST00000333130 PTPRMP28827 1452 aa31.08■■■□□ 2.57
MRPL40-201ENST00000333130 PPP6R1Q9UPN7 881 aa31.07■■■□□ 2.56
MRPL40-201ENST00000333130 FAM135AQ9P2D6 1515 aa31.07■■■□□ 2.56
MRPL40-201ENST00000333130 MROH2AA6NES4 1674 aa31.05■■■□□ 2.56
MRPL40-201ENST00000333130 CLTCQ00610 1675 aaKnown RBP31.04■■■□□ 2.56
MRPL40-201ENST00000333130 ANKRD50Q9ULJ7 1429 aa31■■■□□ 2.55
MRPL40-201ENST00000333130 KDM5DQ9BY66 1539 aa31■■■□□ 2.55
MRPL40-201ENST00000333130 ZC3H13Q5T200 1668 aaKnown RBP31■■■□□ 2.55
MRPL40-201ENST00000333130 DEPDC5O75140 1603 aa30.97■■■□□ 2.55
MRPL40-201ENST00000333130 C3P01024 1663 aa30.97■■■□□ 2.55
MRPL40-201ENST00000333130 GCC2Q8IWJ2 1684 aa30.97■■■□□ 2.55
MRPL40-201ENST00000333130 PRDM15P57071 1507 aaPredicted RBP30.96■■■□□ 2.55
MRPL40-201ENST00000333130 KANK1Q14678 1352 aa30.94■■■□□ 2.54
MRPL40-201ENST00000333130 MROH1Q8NDA8 1641 aa30.94■■■□□ 2.54
MRPL40-201ENST00000333130 WASHC2CQ9Y4E1 1318 aa30.94■■■□□ 2.54
MRPL40-201ENST00000333130 PLPPR3Q6T4P5 718 aa30.92■■■□□ 2.54
MRPL40-201ENST00000333130 CEP152O94986 1710 aa30.9■■■□□ 2.54
MRPL40-201ENST00000333130 ZMYM3Q14202 1370 aa30.88■■■□□ 2.53
MRPL40-201ENST00000333130 HFM1A2PYH4 1435 aa30.87■■■□□ 2.53
MRPL40-201ENST00000333130 ABCC3O15438 1527 aa30.87■■■□□ 2.53
MRPL40-201ENST00000333130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.86■■■□□ 2.53
MRPL40-201ENST00000333130 SETD1BQ9UPS6 1966 aaKnown RBP30.86■■■□□ 2.53
MRPL40-201ENST00000333130 NAIPQ13075 1403 aa30.85■■■□□ 2.53
MRPL40-201ENST00000333130 UNC13BO14795 1591 aa30.84■■■□□ 2.53
MRPL40-201ENST00000333130 CAMSAP1Q5T5Y3 1602 aa30.83■■■□□ 2.53
MRPL40-201ENST00000333130 CEBPAP49715 358 aaPredicted RBP30.83■■■□□ 2.53
MRPL40-201ENST00000333130 PREX1Q8TCU6 1659 aa30.8■■■□□ 2.52
MRPL40-201ENST00000333130 NPATQ14207 1427 aa30.8■■■□□ 2.52
MRPL40-201ENST00000333130 VWDEQ8N2E2 1590 aa30.79■■■□□ 2.52
MRPL40-201ENST00000333130 PZPP20742 1482 aa30.79■■■□□ 2.52
MRPL40-201ENST00000333130 LMTK2Q8IWU2 1503 aa30.76■■■□□ 2.52
MRPL40-201ENST00000333130 TRIM26Q12899 539 aaPredicted RBP30.76■■■□□ 2.51
MRPL40-201ENST00000333130 IQGAP3Q86VI3 1631 aa30.72■■■□□ 2.51
MRPL40-201ENST00000333130 TET3O43151 1660 aa30.72■■■□□ 2.51
MRPL40-201ENST00000333130 CFAP65Q6ZU64 1925 aaKnown RBP30.71■■■□□ 2.51
MRPL40-201ENST00000333130 UHRF1BP1Q6BDS2 1440 aa30.71■■■□□ 2.51
MRPL40-201ENST00000333130 EFCAB6Q5THR3 1501 aa30.7■■■□□ 2.51
MRPL40-201ENST00000333130 ARHGAP31Q2M1Z3 1444 aa30.7■■■□□ 2.5
MRPL40-201ENST00000333130 NUP155O75694 1391 aa30.69■■■□□ 2.5
MRPL40-201ENST00000333130 MYO3AQ8NEV4 1616 aa30.66■■■□□ 2.5
MRPL40-201ENST00000333130 SETD5Q9C0A6 1442 aa30.66■■■□□ 2.5
MRPL40-201ENST00000333130 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.5
MRPL40-201ENST00000333130 ACIN1Q9UKV3 1341 aaKnown RBP30.64■■■□□ 2.5
MRPL40-201ENST00000333130 TNRQ92752 1358 aa30.64■■■□□ 2.49
MRPL40-201ENST00000333130 SPATA31D1Q6ZQQ2 1576 aa30.63■■■□□ 2.49
MRPL40-201ENST00000333130 ERVK-7P63135 1459 aa30.63■■■□□ 2.49
MRPL40-201ENST00000333130 RPRD2Q5VT52 1461 aaKnown RBP30.63■■■□□ 2.49
MRPL40-201ENST00000333130 ZNF142P52746 1687 aaPredicted RBP30.61■■■□□ 2.49
MRPL40-201ENST00000333130 FBXO31Q5XUX0 539 aaPredicted RBP30.6■■■□□ 2.49
MRPL40-201ENST00000333130 TRIM52Q96A61 297 aa30.59■■■□□ 2.49
MRPL40-201ENST00000333130 RAB3GAP2Q9H2M9 1393 aa30.57■■■□□ 2.48
MRPL40-201ENST00000333130 CEP170BQ9Y4F5 1589 aaPredicted RBP30.57■■■□□ 2.48
MRPL40-201ENST00000333130 NLRP1Q9C000 1473 aa30.56■■■□□ 2.48
MRPL40-201ENST00000333130 E9PCH4 1651 aa30.56■■■□□ 2.48
MRPL40-201ENST00000333130 A2ML1A8K2U0 1454 aa30.52■■■□□ 2.48
MRPL40-201ENST00000333130 HRCP23327 699 aa30.48■■■□□ 2.47
MRPL40-201ENST00000333130 NOS1P29475 1434 aa30.47■■■□□ 2.47
MRPL40-201ENST00000333130 SYNMO15061 1565 aa30.45■■■□□ 2.47
MRPL40-201ENST00000333130 SLC4A1APQ9BWU0 796 aaKnown RBP30.45■■■□□ 2.47
MRPL40-201ENST00000333130 SPHKAPQ2M3C7 1700 aa30.45■■■□□ 2.47
MRPL40-201ENST00000333130 HSPA2P54652 639 aa30.44■■■□□ 2.46
MRPL40-201ENST00000333130 UGGT1Q9NYU2 1555 aa30.44■■■□□ 2.46
MRPL40-201ENST00000333130 SLC52A1Q9NWF4 448 aa30.4■■■□□ 2.46
MRPL40-201ENST00000333130 KDM5AP29375 1690 aaKnown RBP30.39■■■□□ 2.46
MRPL40-201ENST00000333130 PIK3C2BO00750 1634 aa30.39■■■□□ 2.46
MRPL40-201ENST00000333130 UBR1Q8IWV7 1749 aa30.39■■■□□ 2.46
MRPL40-201ENST00000333130 THEMISQ8N1K5 641 aaPredicted RBP30.38■■■□□ 2.45
MRPL40-201ENST00000333130 PKD2Q13563 968 aa30.37■■■□□ 2.45
MRPL40-201ENST00000333130 STAG3Q9UJ98 1225 aa30.37■■■□□ 2.45
MRPL40-201ENST00000333130 PLA2R1Q13018 1463 aa30.36■■■□□ 2.45
MRPL40-201ENST00000333130 PCGF6Q9BYE7 350 aa30.35■■■□□ 2.45
MRPL40-201ENST00000333130 MPHOSPH9Q99550 1183 aa30.32■■■□□ 2.44
MRPL40-201ENST00000333130 ADGRB3O60242 1522 aa30.32■■■□□ 2.44
MRPL40-201ENST00000333130 TRPM2O94759 1503 aa30.32■■■□□ 2.44
MRPL40-201ENST00000333130 POLR1AO95602 1720 aaPredicted RBP30.31■■■□□ 2.44
MRPL40-201ENST00000333130 IDI1Q13907 227 aa30.31■■■□□ 2.44
MRPL40-201ENST00000333130 PTPRTO14522 1441 aa30.31■■■□□ 2.44
MRPL40-201ENST00000333130 STRCQ7RTU9 1775 aa30.3■■■□□ 2.44
MRPL40-201ENST00000333130 DMRT2Q9Y5R5 561 aa30.27■■■□□ 2.44
MRPL40-201ENST00000333130 KIF1BO60333 1816 aa30.25■■■□□ 2.43
MRPL40-201ENST00000333130 MYO5BQ9ULV0 1848 aa30.25■■■□□ 2.43
MRPL40-201ENST00000333130 TMEM131LA2VDJ0 1609 aa30.23■■■□□ 2.43
MRPL40-201ENST00000333130 CLTCL1P53675 1640 aa30.22■■■□□ 2.43
MRPL40-201ENST00000333130 ANKLE2Q86XL3 938 aa30.22■■■□□ 2.43
MRPL40-201ENST00000333130 SLIT1O75093 1534 aa30.21■■■□□ 2.43
MRPL40-201ENST00000333130 CHGAP10645 457 aaKnown RBP30.21■■■□□ 2.43
MRPL40-201ENST00000333130 FOXD1Q16676 465 aa30.18■■■□□ 2.42
MRPL40-201ENST00000333130 EID1Q9Y6B2 187 aa30.18■■■□□ 2.42
MRPL40-201ENST00000333130 ARHGAP23Q9P227 1491 aa30.18■■■□□ 2.42
MRPL40-201ENST00000333130 TMEM2Q9UHN6 1383 aa30.17■■■□□ 2.42
MRPL40-201ENST00000333130 NCKAP5LQ9HCH0 1330 aa30.17■■■□□ 2.42
MRPL40-201ENST00000333130 CCDC144AA2RUR9 1427 aa30.17■■■□□ 2.42
MRPL40-201ENST00000333130 SCAF11Q99590 1463 aaKnown RBP30.15■■■□□ 2.42
MRPL40-201ENST00000333130 HDGFP51858 240 aaKnown RBP30.13■■■□□ 2.41
MRPL40-201ENST00000333130 NEURL4Q96JN8 1562 aa30.12■■■□□ 2.41
MRPL40-201ENST00000333130 IQGAP1P46940 1657 aa30.11■■■□□ 2.41
MRPL40-201ENST00000333130 TXNDC2Q86VQ3 553 aa30.1■■■□□ 2.41
MRPL40-201ENST00000333130 MED14O60244 1454 aa30.1■■■□□ 2.41
MRPL40-201ENST00000333130 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms