RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
COL4A3-201ENST00000304990 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
COL4A3-201ENST00000304990 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
COL4A3-201ENST00000304990 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
COL4A3-201ENST00000304990 SHANK2Q9UPX8 1470 aa16.45■□□□□ 0.22
COL4A3-201ENST00000304990 TNRQ92752 1358 aa16.41■□□□□ 0.22
COL4A3-201ENST00000304990 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
COL4A3-201ENST00000304990 NEURL4Q96JN8 1562 aa16.41■□□□□ 0.22
COL4A3-201ENST00000304990 MTUS2Q5JR59 1369 aa16.38■□□□□ 0.21
COL4A3-201ENST00000304990 KIF3BO15066 747 aa16.37■□□□□ 0.21
COL4A3-201ENST00000304990 FBXO31Q5XUX0 539 aaPredicted RBP16.37■□□□□ 0.21
COL4A3-201ENST00000304990 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
COL4A3-201ENST00000304990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL4A3-201ENST00000304990 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
COL4A3-201ENST00000304990 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
COL4A3-201ENST00000304990 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
COL4A3-201ENST00000304990 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
COL4A3-201ENST00000304990 PZPP20742 1482 aa16.35■□□□□ 0.21
COL4A3-201ENST00000304990 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
COL4A3-201ENST00000304990 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
COL4A3-201ENST00000304990 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
COL4A3-201ENST00000304990 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
COL4A3-201ENST00000304990 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
COL4A3-201ENST00000304990 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.2
COL4A3-201ENST00000304990 DEPDC5O75140 1603 aa16.33■□□□□ 0.2
COL4A3-201ENST00000304990 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
COL4A3-201ENST00000304990 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
COL4A3-201ENST00000304990 NLRP1Q9C000 1473 aa16.31■□□□□ 0.2
COL4A3-201ENST00000304990 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
COL4A3-201ENST00000304990 SYNMO15061 1565 aa16.3■□□□□ 0.2
COL4A3-201ENST00000304990 MED14O60244 1454 aa16.29■□□□□ 0.2
COL4A3-201ENST00000304990 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
COL4A3-201ENST00000304990 ADRA2BP18089 450 aa16.29■□□□□ 0.2
COL4A3-201ENST00000304990 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
COL4A3-201ENST00000304990 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
COL4A3-201ENST00000304990 EHBP1L1Q8N3D4 1523 aa16.28■□□□□ 0.2
COL4A3-201ENST00000304990 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
COL4A3-201ENST00000304990 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
COL4A3-201ENST00000304990 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
COL4A3-201ENST00000304990 ZC3H13Q5T200 1668 aaKnown RBP16.22■□□□□ 0.19
COL4A3-201ENST00000304990 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
COL4A3-201ENST00000304990 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
COL4A3-201ENST00000304990 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
COL4A3-201ENST00000304990 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
COL4A3-201ENST00000304990 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
COL4A3-201ENST00000304990 UBR1Q8IWV7 1749 aa16.18■□□□□ 0.18
COL4A3-201ENST00000304990 CEP152O94986 1710 aa16.17■□□□□ 0.18
COL4A3-201ENST00000304990 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
COL4A3-201ENST00000304990 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
COL4A3-201ENST00000304990 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
COL4A3-201ENST00000304990 ABCC3O15438 1527 aa16.16■□□□□ 0.18
COL4A3-201ENST00000304990 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
COL4A3-201ENST00000304990 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
COL4A3-201ENST00000304990 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
COL4A3-201ENST00000304990 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
COL4A3-201ENST00000304990 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
COL4A3-201ENST00000304990 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
COL4A3-201ENST00000304990 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
COL4A3-201ENST00000304990 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
COL4A3-201ENST00000304990 ROBO1Q9Y6N7 1651 aa16.09■□□□□ 0.17
COL4A3-201ENST00000304990 SETD1AO15047 1707 aaKnown RBP16.09■□□□□ 0.17
COL4A3-201ENST00000304990 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
COL4A3-201ENST00000304990 MAST1Q9Y2H9 1570 aa16.09■□□□□ 0.17
COL4A3-201ENST00000304990 LTKP29376 864 aa16.08■□□□□ 0.16
COL4A3-201ENST00000304990 SLIT1O75093 1534 aa16.08■□□□□ 0.16
COL4A3-201ENST00000304990 PIK3C2BO00750 1634 aa16.06■□□□□ 0.16
COL4A3-201ENST00000304990 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
COL4A3-201ENST00000304990 ARHGAP23Q9P227 1491 aa16.06■□□□□ 0.16
COL4A3-201ENST00000304990 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
COL4A3-201ENST00000304990 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
COL4A3-201ENST00000304990 PHLPP1O60346 1717 aa16.04■□□□□ 0.16
COL4A3-201ENST00000304990 DUOX2Q9NRD8 1548 aa16.04■□□□□ 0.16
COL4A3-201ENST00000304990 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
COL4A3-201ENST00000304990 BCANQ96GW7 911 aa16.03■□□□□ 0.16
COL4A3-201ENST00000304990 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
COL4A3-201ENST00000304990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL4A3-201ENST00000304990 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
COL4A3-201ENST00000304990 KCNA6P17658 529 aa16.01■□□□□ 0.15
COL4A3-201ENST00000304990 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
COL4A3-201ENST00000304990 MSH6P52701 1360 aa16■□□□□ 0.15
COL4A3-201ENST00000304990 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
COL4A3-201ENST00000304990 KANK1Q14678 1352 aa15.99■□□□□ 0.15
COL4A3-201ENST00000304990 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
COL4A3-201ENST00000304990 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
COL4A3-201ENST00000304990 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
COL4A3-201ENST00000304990 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
COL4A3-201ENST00000304990 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
COL4A3-201ENST00000304990 JCADQ9P266 1359 aa15.97■□□□□ 0.15
COL4A3-201ENST00000304990 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
COL4A3-201ENST00000304990 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
COL4A3-201ENST00000304990 SLAIN2Q9P270 581 aa15.95■□□□□ 0.14
COL4A3-201ENST00000304990 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
COL4A3-201ENST00000304990 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
COL4A3-201ENST00000304990 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
COL4A3-201ENST00000304990 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
COL4A3-201ENST00000304990 CROCC2H7BZ55 1655 aa15.94■□□□□ 0.14
COL4A3-201ENST00000304990 TET3O43151 1660 aa15.92■□□□□ 0.14
COL4A3-201ENST00000304990 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
COL4A3-201ENST00000304990 IDI1Q13907 227 aa15.92■□□□□ 0.14
COL4A3-201ENST00000304990 ZNF772Q68DY9 489 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms