RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 A2ML1A8K2U0 1454 aa17.4■□□□□ 0.38
NSMCE2-201ENST00000287437 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
NSMCE2-201ENST00000287437 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
NSMCE2-201ENST00000287437 DHX29Q7Z478 1369 aaKnown RBP17.37■□□□□ 0.37
NSMCE2-201ENST00000287437 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
NSMCE2-201ENST00000287437 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
NSMCE2-201ENST00000287437 KIF3BO15066 747 aa17.34■□□□□ 0.37
NSMCE2-201ENST00000287437 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
NSMCE2-201ENST00000287437 TNRQ92752 1358 aa17.34■□□□□ 0.37
NSMCE2-201ENST00000287437 NEURL4Q96JN8 1562 aa17.33■□□□□ 0.37
NSMCE2-201ENST00000287437 SCAF1Q9H7N4 1312 aaKnown RBP17.33■□□□□ 0.36
NSMCE2-201ENST00000287437 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
NSMCE2-201ENST00000287437 PZPP20742 1482 aa17.32■□□□□ 0.36
NSMCE2-201ENST00000287437 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
NSMCE2-201ENST00000287437 POLR1AO95602 1720 aaPredicted RBP17.31■□□□□ 0.36
NSMCE2-201ENST00000287437 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
NSMCE2-201ENST00000287437 HSPA1LP34931 641 aa17.3■□□□□ 0.36
NSMCE2-201ENST00000287437 CPS1P31327 1500 aa17.3■□□□□ 0.36
NSMCE2-201ENST00000287437 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
NSMCE2-201ENST00000287437 SHANK2Q9UPX8 1470 aa17.3■□□□□ 0.36
NSMCE2-201ENST00000287437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
NSMCE2-201ENST00000287437 WASHC2CQ9Y4E1 1318 aa17.29■□□□□ 0.36
NSMCE2-201ENST00000287437 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
NSMCE2-201ENST00000287437 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
NSMCE2-201ENST00000287437 TOM1O60784 492 aa17.27■□□□□ 0.36
NSMCE2-201ENST00000287437 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.35
NSMCE2-201ENST00000287437 ANKLE2Q86XL3 938 aa17.26■□□□□ 0.35
NSMCE2-201ENST00000287437 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
NSMCE2-201ENST00000287437 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
NSMCE2-201ENST00000287437 UGGT1Q9NYU2 1555 aa17.25■□□□□ 0.35
NSMCE2-201ENST00000287437 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
NSMCE2-201ENST00000287437 THEMISQ8N1K5 641 aaPredicted RBP17.24■□□□□ 0.35
NSMCE2-201ENST00000287437 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
NSMCE2-201ENST00000287437 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
NSMCE2-201ENST00000287437 ARHGEF5Q12774 1597 aa17.21■□□□□ 0.35
NSMCE2-201ENST00000287437 MED14O60244 1454 aa17.21■□□□□ 0.35
NSMCE2-201ENST00000287437 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
NSMCE2-201ENST00000287437 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
NSMCE2-201ENST00000287437 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
NSMCE2-201ENST00000287437 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
NSMCE2-201ENST00000287437 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
NSMCE2-201ENST00000287437 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
NSMCE2-201ENST00000287437 ABCC3O15438 1527 aa17.17■□□□□ 0.34
NSMCE2-201ENST00000287437 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
NSMCE2-201ENST00000287437 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
NSMCE2-201ENST00000287437 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
NSMCE2-201ENST00000287437 STRCP1A6NGW2 1772 aa17.14■□□□□ 0.33
NSMCE2-201ENST00000287437 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
NSMCE2-201ENST00000287437 MROH1Q8NDA8 1641 aa17.12■□□□□ 0.33
NSMCE2-201ENST00000287437 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
NSMCE2-201ENST00000287437 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
NSMCE2-201ENST00000287437 SYNMO15061 1565 aa17.11■□□□□ 0.33
NSMCE2-201ENST00000287437 CEP152O94986 1710 aa17.08■□□□□ 0.32
NSMCE2-201ENST00000287437 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.32
NSMCE2-201ENST00000287437 SCAF11Q99590 1463 aaKnown RBP17.08■□□□□ 0.32
NSMCE2-201ENST00000287437 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
NSMCE2-201ENST00000287437 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
NSMCE2-201ENST00000287437 LTKP29376 864 aa17.05■□□□□ 0.32
NSMCE2-201ENST00000287437 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
NSMCE2-201ENST00000287437 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
NSMCE2-201ENST00000287437 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
NSMCE2-201ENST00000287437 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
NSMCE2-201ENST00000287437 SLIT1O75093 1534 aa17.03■□□□□ 0.32
NSMCE2-201ENST00000287437 PRDM15P57071 1507 aaPredicted RBP17.02■□□□□ 0.32
NSMCE2-201ENST00000287437 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
NSMCE2-201ENST00000287437 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
NSMCE2-201ENST00000287437 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
NSMCE2-201ENST00000287437 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
NSMCE2-201ENST00000287437 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
NSMCE2-201ENST00000287437 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
NSMCE2-201ENST00000287437 MAP3K1Q13233 1512 aa16.98■□□□□ 0.31
NSMCE2-201ENST00000287437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.31
NSMCE2-201ENST00000287437 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
NSMCE2-201ENST00000287437 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
NSMCE2-201ENST00000287437 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
NSMCE2-201ENST00000287437 ABCC5O15440 1437 aa16.97■□□□□ 0.31
NSMCE2-201ENST00000287437 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
NSMCE2-201ENST00000287437 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
NSMCE2-201ENST00000287437 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
NSMCE2-201ENST00000287437 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
NSMCE2-201ENST00000287437 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
NSMCE2-201ENST00000287437 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
NSMCE2-201ENST00000287437 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
NSMCE2-201ENST00000287437 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
NSMCE2-201ENST00000287437 KANK1Q14678 1352 aa16.92■□□□□ 0.3
NSMCE2-201ENST00000287437 DAPK1P53355 1430 aa16.92■□□□□ 0.3
NSMCE2-201ENST00000287437 IDI1Q13907 227 aa16.91■□□□□ 0.3
NSMCE2-201ENST00000287437 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
NSMCE2-201ENST00000287437 SLC26A8Q96RN1 970 aa16.91■□□□□ 0.3
NSMCE2-201ENST00000287437 KCNA6P17658 529 aa16.89■□□□□ 0.29
NSMCE2-201ENST00000287437 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
NSMCE2-201ENST00000287437 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
NSMCE2-201ENST00000287437 TET3O43151 1660 aa16.88■□□□□ 0.29
NSMCE2-201ENST00000287437 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
NSMCE2-201ENST00000287437 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
NSMCE2-201ENST00000287437 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
NSMCE2-201ENST00000287437 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
NSMCE2-201ENST00000287437 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
NSMCE2-201ENST00000287437 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
NSMCE2-201ENST00000287437 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms