RNA–Protein interactions for RNA: ENST00000275223.7

VNN3-201, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-201ENST00000275223 ATP7AQ04656 1500 aa12.21□□□□□ -0.45
VNN3-201ENST00000275223 DHX29Q7Z478 1369 aaKnown RBP12.21□□□□□ -0.45
VNN3-201ENST00000275223 MROH2AA6NES4 1674 aa12.2□□□□□ -0.46
VNN3-201ENST00000275223 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
VNN3-201ENST00000275223 TOM1O60784 492 aa12.2□□□□□ -0.46
VNN3-201ENST00000275223 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
VNN3-201ENST00000275223 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
VNN3-201ENST00000275223 MBD5Q9P267 1494 aa12.19□□□□□ -0.46
VNN3-201ENST00000275223 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
VNN3-201ENST00000275223 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
VNN3-201ENST00000275223 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
VNN3-201ENST00000275223 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
VNN3-201ENST00000275223 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
VNN3-201ENST00000275223 TNRQ92752 1358 aa12.17□□□□□ -0.46
VNN3-201ENST00000275223 KIF3BO15066 747 aa12.16□□□□□ -0.46
VNN3-201ENST00000275223 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
VNN3-201ENST00000275223 INO80Q9ULG1 1556 aaPredicted RBP12.16□□□□□ -0.46
VNN3-201ENST00000275223 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
VNN3-201ENST00000275223 WASHC2CQ9Y4E1 1318 aa12.15□□□□□ -0.46
VNN3-201ENST00000275223 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
VNN3-201ENST00000275223 CPS1P31327 1500 aa12.14□□□□□ -0.47
VNN3-201ENST00000275223 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 HSPA1LP34931 641 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 LRRIQ1Q96JM4 1722 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 PZPP20742 1482 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
VNN3-201ENST00000275223 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
VNN3-201ENST00000275223 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
VNN3-201ENST00000275223 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
VNN3-201ENST00000275223 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
VNN3-201ENST00000275223 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
VNN3-201ENST00000275223 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
VNN3-201ENST00000275223 MED14O60244 1454 aa12.1□□□□□ -0.47
VNN3-201ENST00000275223 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
VNN3-201ENST00000275223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
VNN3-201ENST00000275223 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
VNN3-201ENST00000275223 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
VNN3-201ENST00000275223 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
VNN3-201ENST00000275223 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
VNN3-201ENST00000275223 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
VNN3-201ENST00000275223 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
VNN3-201ENST00000275223 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
VNN3-201ENST00000275223 FKBP8Q14318 412 aa12.06□□□□□ -0.48
VNN3-201ENST00000275223 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
VNN3-201ENST00000275223 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
VNN3-201ENST00000275223 NCOA2Q15596 1464 aa12.04□□□□□ -0.48
VNN3-201ENST00000275223 NEURL4Q96JN8 1562 aa12.04□□□□□ -0.48
VNN3-201ENST00000275223 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
VNN3-201ENST00000275223 DCAF8L1A6NGE4 600 aa12.02□□□□□ -0.49
VNN3-201ENST00000275223 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
VNN3-201ENST00000275223 MED1Q15648 1581 aaPredicted RBP12.01□□□□□ -0.49
VNN3-201ENST00000275223 DEPDC5O75140 1603 aa12□□□□□ -0.49
VNN3-201ENST00000275223 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
VNN3-201ENST00000275223 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
VNN3-201ENST00000275223 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
VNN3-201ENST00000275223 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
VNN3-201ENST00000275223 ABCC3O15438 1527 aa11.97□□□□□ -0.49
VNN3-201ENST00000275223 ARHGAP31Q2M1Z3 1444 aa11.97□□□□□ -0.49
VNN3-201ENST00000275223 TXNDC2Q86VQ3 553 aa11.97□□□□□ -0.49
VNN3-201ENST00000275223 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
VNN3-201ENST00000275223 LTKP29376 864 aa11.96□□□□□ -0.49
VNN3-201ENST00000275223 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
VNN3-201ENST00000275223 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
VNN3-201ENST00000275223 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
VNN3-201ENST00000275223 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
VNN3-201ENST00000275223 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
VNN3-201ENST00000275223 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
VNN3-201ENST00000275223 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
VNN3-201ENST00000275223 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
VNN3-201ENST00000275223 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
VNN3-201ENST00000275223 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
VNN3-201ENST00000275223 SLIT1O75093 1534 aa11.92□□□□□ -0.5
VNN3-201ENST00000275223 ERBINQ96RT1 1412 aa11.92□□□□□ -0.5
VNN3-201ENST00000275223 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
VNN3-201ENST00000275223 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
VNN3-201ENST00000275223 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 KCNA6P17658 529 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 RGS17Q9UGC6 210 aaPredicted RBP11.91□□□□□ -0.5
VNN3-201ENST00000275223 SYNMO15061 1565 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 KANK1Q14678 1352 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
VNN3-201ENST00000275223 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
VNN3-201ENST00000275223 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
VNN3-201ENST00000275223 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
VNN3-201ENST00000275223 EIF2AK4Q9P2K8 1649 aaKnown RBP11.89□□□□□ -0.51
VNN3-201ENST00000275223 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
VNN3-201ENST00000275223 SLC52A1Q9NWF4 448 aa11.88□□□□□ -0.51
VNN3-201ENST00000275223 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
VNN3-201ENST00000275223 IDI1Q13907 227 aa11.87□□□□□ -0.51
VNN3-201ENST00000275223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
VNN3-201ENST00000275223 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
VNN3-201ENST00000275223 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
VNN3-201ENST00000275223 ABCC5O15440 1437 aa11.86□□□□□ -0.51
VNN3-201ENST00000275223 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
VNN3-201ENST00000275223 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
VNN3-201ENST00000275223 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
VNN3-201ENST00000275223 LMTK2Q8IWU2 1503 aa11.83□□□□□ -0.52
VNN3-201ENST00000275223 APLP2Q06481 763 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms