RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
NPC2-201ENST00000238633 SHANK2Q9UPX8 1470 aa15.42■□□□□ 0.06
NPC2-201ENST00000238633 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
NPC2-201ENST00000238633 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
NPC2-201ENST00000238633 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
NPC2-201ENST00000238633 NEURL4Q96JN8 1562 aa15.41■□□□□ 0.06
NPC2-201ENST00000238633 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
NPC2-201ENST00000238633 CPS1P31327 1500 aa15.39■□□□□ 0.05
NPC2-201ENST00000238633 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
NPC2-201ENST00000238633 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
NPC2-201ENST00000238633 TNRQ92752 1358 aa15.36■□□□□ 0.05
NPC2-201ENST00000238633 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
NPC2-201ENST00000238633 RGS17Q9UGC6 210 aaPredicted RBP15.36■□□□□ 0.05
NPC2-201ENST00000238633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
NPC2-201ENST00000238633 PLEKHH2Q8IVE3 1493 aa15.35■□□□□ 0.05
NPC2-201ENST00000238633 ANKLE2Q86XL3 938 aa15.34■□□□□ 0.05
NPC2-201ENST00000238633 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
NPC2-201ENST00000238633 MBD5Q9P267 1494 aa15.33■□□□□ 0.05
NPC2-201ENST00000238633 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
NPC2-201ENST00000238633 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
NPC2-201ENST00000238633 CCNB3Q8WWL7 1395 aa15.32■□□□□ 0.04
NPC2-201ENST00000238633 MED14O60244 1454 aa15.31■□□□□ 0.04
NPC2-201ENST00000238633 PZPP20742 1482 aa15.31■□□□□ 0.04
NPC2-201ENST00000238633 KIF3BO15066 747 aa15.3■□□□□ 0.04
NPC2-201ENST00000238633 NPHP4O75161 1426 aaPredicted RBP15.3■□□□□ 0.04
NPC2-201ENST00000238633 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
NPC2-201ENST00000238633 MIA2Q96PC5 1412 aa15.3■□□□□ 0.04
NPC2-201ENST00000238633 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
NPC2-201ENST00000238633 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
NPC2-201ENST00000238633 POLR1AO95602 1720 aaPredicted RBP15.27■□□□□ 0.04
NPC2-201ENST00000238633 ADGBQ8N7X0 1667 aa15.27■□□□□ 0.03
NPC2-201ENST00000238633 WASHC2CQ9Y4E1 1318 aa15.26■□□□□ 0.03
NPC2-201ENST00000238633 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
NPC2-201ENST00000238633 KDM5DQ9BY66 1539 aa15.24■□□□□ 0.03
NPC2-201ENST00000238633 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
NPC2-201ENST00000238633 DEPDC5O75140 1603 aa15.23■□□□□ 0.03
NPC2-201ENST00000238633 STRCP1A6NGW2 1772 aa15.23■□□□□ 0.03
NPC2-201ENST00000238633 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
NPC2-201ENST00000238633 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
NPC2-201ENST00000238633 POTEAQ6S8J7 498 aa15.22■□□□□ 0.03
NPC2-201ENST00000238633 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
NPC2-201ENST00000238633 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
NPC2-201ENST00000238633 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
NPC2-201ENST00000238633 IQGAP1P46940 1657 aa15.18■□□□□ 0.02
NPC2-201ENST00000238633 LTKP29376 864 aa15.17■□□□□ 0.02
NPC2-201ENST00000238633 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
NPC2-201ENST00000238633 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
NPC2-201ENST00000238633 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
NPC2-201ENST00000238633 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
NPC2-201ENST00000238633 SYNMO15061 1565 aa15.14■□□□□ 0.01
NPC2-201ENST00000238633 ABCC3O15438 1527 aa15.13■□□□□ 0.01
NPC2-201ENST00000238633 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
NPC2-201ENST00000238633 RSPH4AQ5TD94 716 aa15.13■□□□□ 0.01
NPC2-201ENST00000238633 ERVK-7P63135 1459 aa15.13■□□□□ 0.01
NPC2-201ENST00000238633 CAMSAP2Q08AD1 1489 aa15.12■□□□□ 0.01
NPC2-201ENST00000238633 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
NPC2-201ENST00000238633 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
NPC2-201ENST00000238633 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
NPC2-201ENST00000238633 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
NPC2-201ENST00000238633 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
NPC2-201ENST00000238633 TSPY4P0CV99 314 aa15.08■□□□□ 0
NPC2-201ENST00000238633 TSPY10P0CW01 314 aa15.08■□□□□ 0
NPC2-201ENST00000238633 SLIT1O75093 1534 aa15.07■□□□□ 0
NPC2-201ENST00000238633 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
NPC2-201ENST00000238633 TMEM94Q12767 1356 aa15.06■□□□□ 0
NPC2-201ENST00000238633 MROH1Q8NDA8 1641 aa15.06■□□□□ 0
NPC2-201ENST00000238633 SRCAPQ6ZRS2 3230 aa15.05■□□□□ 0
NPC2-201ENST00000238633 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ -0
NPC2-201ENST00000238633 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
NPC2-201ENST00000238633 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
NPC2-201ENST00000238633 TMEM2Q9UHN6 1383 aa15.02■□□□□ -0
NPC2-201ENST00000238633 KCNA6P17658 529 aa15.02■□□□□ -0
NPC2-201ENST00000238633 EID1Q9Y6B2 187 aa15.02■□□□□ -0
NPC2-201ENST00000238633 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
NPC2-201ENST00000238633 PROSER2Q86WR7 435 aaPredicted RBP15□□□□□ -0.01
NPC2-201ENST00000238633 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
NPC2-201ENST00000238633 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
NPC2-201ENST00000238633 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
NPC2-201ENST00000238633 ROBO1Q9Y6N7 1651 aa14.98□□□□□ -0.01
NPC2-201ENST00000238633 UPF1Q92900 1129 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPC2-201ENST00000238633 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
NPC2-201ENST00000238633 IDI1Q13907 227 aa14.97□□□□□ -0.01
NPC2-201ENST00000238633 TET3O43151 1660 aa14.97□□□□□ -0.01
NPC2-201ENST00000238633 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
NPC2-201ENST00000238633 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
NPC2-201ENST00000238633 JCADQ9P266 1359 aa14.96□□□□□ -0.02
NPC2-201ENST00000238633 PRDM15P57071 1507 aaPredicted RBP14.95□□□□□ -0.02
NPC2-201ENST00000238633 CEP152O94986 1710 aa14.95□□□□□ -0.02
NPC2-201ENST00000238633 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
NPC2-201ENST00000238633 PIK3C2BO00750 1634 aa14.93□□□□□ -0.02
NPC2-201ENST00000238633 LRRC9Q6ZRR7 1453 aa14.93□□□□□ -0.02
NPC2-201ENST00000238633 DUOX2Q9NRD8 1548 aa14.92□□□□□ -0.02
NPC2-201ENST00000238633 LRP6O75581 1613 aa14.92□□□□□ -0.02
NPC2-201ENST00000238633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
NPC2-201ENST00000238633 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
NPC2-201ENST00000238633 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
NPC2-201ENST00000238633 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
NPC2-201ENST00000238633 MSH6P52701 1360 aa14.9□□□□□ -0.02
NPC2-201ENST00000238633 TRIM52Q96A61 297 aa14.9□□□□□ -0.02
NPC2-201ENST00000238633 RRP7BPQ9NSQ0 103 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms