RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 ITGAEP38570 1179 aa29.23■■■□□ 2.27
CENPA-201ENST00000233505 FER1L4A9Z1Z3 1794 aa29.23■■■□□ 2.27
CENPA-201ENST00000233505 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
CENPA-201ENST00000233505 GGT6Q6P531 493 aa29.22■■■□□ 2.27
CENPA-201ENST00000233505 ANKRD50Q9ULJ7 1429 aa29.21■■■□□ 2.27
CENPA-201ENST00000233505 ESF1Q9H501 851 aaKnown RBP29.19■■■□□ 2.26
CENPA-201ENST00000233505 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
CENPA-201ENST00000233505 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
CENPA-201ENST00000233505 KDM5DQ9BY66 1539 aa29.15■■■□□ 2.26
CENPA-201ENST00000233505 MROH1Q8NDA8 1641 aa29.14■■■□□ 2.26
CENPA-201ENST00000233505 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
CENPA-201ENST00000233505 HFM1A2PYH4 1435 aa29.11■■■□□ 2.25
CENPA-201ENST00000233505 MROH2AA6NES4 1674 aa29.11■■■□□ 2.25
CENPA-201ENST00000233505 NAIPQ13075 1403 aa29.1■■■□□ 2.25
CENPA-201ENST00000233505 CEBPAP49715 358 aaPredicted RBP29.09■■■□□ 2.25
CENPA-201ENST00000233505 WASHC2CQ9Y4E1 1318 aa29.09■■■□□ 2.25
CENPA-201ENST00000233505 ZMYM3Q14202 1370 aa29.08■■■□□ 2.25
CENPA-201ENST00000233505 ABCC3O15438 1527 aa29.08■■■□□ 2.25
CENPA-201ENST00000233505 KANK1Q14678 1352 aa29.06■■■□□ 2.24
CENPA-201ENST00000233505 ZC3H13Q5T200 1668 aaKnown RBP29.05■■■□□ 2.24
CENPA-201ENST00000233505 VWDEQ8N2E2 1590 aa29.05■■■□□ 2.24
CENPA-201ENST00000233505 CLTCQ00610 1675 aaKnown RBP29.03■■■□□ 2.24
CENPA-201ENST00000233505 HSPA2P54652 639 aa29.03■■■□□ 2.24
CENPA-201ENST00000233505 LMTK2Q8IWU2 1503 aa29.03■■■□□ 2.24
CENPA-201ENST00000233505 NPATQ14207 1427 aa29.03■■■□□ 2.24
CENPA-201ENST00000233505 UNC13BO14795 1591 aa29.01■■■□□ 2.23
CENPA-201ENST00000233505 GCC2Q8IWJ2 1684 aa29■■■□□ 2.23
CENPA-201ENST00000233505 PZPP20742 1482 aa29■■■□□ 2.23
CENPA-201ENST00000233505 C3P01024 1663 aa28.99■■■□□ 2.23
CENPA-201ENST00000233505 ARHGAP31Q2M1Z3 1444 aa28.98■■■□□ 2.23
CENPA-201ENST00000233505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.98■■■□□ 2.23
CENPA-201ENST00000233505 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
CENPA-201ENST00000233505 PREX1Q8TCU6 1659 aa28.9■■■□□ 2.22
CENPA-201ENST00000233505 NUP155O75694 1391 aa28.89■■■□□ 2.22
CENPA-201ENST00000233505 EFCAB6Q5THR3 1501 aa28.89■■■□□ 2.21
CENPA-201ENST00000233505 CEP152O94986 1710 aa28.88■■■□□ 2.21
CENPA-201ENST00000233505 IQGAP3Q86VI3 1631 aa28.87■■■□□ 2.21
CENPA-201ENST00000233505 ACIN1Q9UKV3 1341 aaKnown RBP28.87■■■□□ 2.21
CENPA-201ENST00000233505 ILDR1Q86SU0 546 aaPredicted RBP28.86■■■□□ 2.21
CENPA-201ENST00000233505 UHRF1BP1Q6BDS2 1440 aa28.86■■■□□ 2.21
CENPA-201ENST00000233505 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
CENPA-201ENST00000233505 ERVK-7P63135 1459 aa28.85■■■□□ 2.21
CENPA-201ENST00000233505 RPRD2Q5VT52 1461 aaKnown RBP28.85■■■□□ 2.21
CENPA-201ENST00000233505 SPATA31D1Q6ZQQ2 1576 aa28.84■■■□□ 2.21
CENPA-201ENST00000233505 TNRQ92752 1358 aa28.84■■■□□ 2.21
CENPA-201ENST00000233505 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
CENPA-201ENST00000233505 TET3O43151 1660 aa28.83■■■□□ 2.21
CENPA-201ENST00000233505 SETD1BQ9UPS6 1966 aaKnown RBP28.81■■■□□ 2.2
CENPA-201ENST00000233505 NLRP1Q9C000 1473 aa28.78■■■□□ 2.2
CENPA-201ENST00000233505 NOS1P29475 1434 aa28.77■■■□□ 2.2
CENPA-201ENST00000233505 MYO3AQ8NEV4 1616 aa28.75■■■□□ 2.19
CENPA-201ENST00000233505 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
CENPA-201ENST00000233505 HRCP23327 699 aa28.74■■■□□ 2.19
CENPA-201ENST00000233505 A2ML1A8K2U0 1454 aa28.73■■■□□ 2.19
CENPA-201ENST00000233505 TRIM52Q96A61 297 aa28.73■■■□□ 2.19
CENPA-201ENST00000233505 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
CENPA-201ENST00000233505 CEP170BQ9Y4F5 1589 aaPredicted RBP28.71■■■□□ 2.19
CENPA-201ENST00000233505 ZNF142P52746 1687 aaPredicted RBP28.7■■■□□ 2.19
CENPA-201ENST00000233505 E9PCH4 1651 aa28.67■■■□□ 2.18
CENPA-201ENST00000233505 STRCQ7RTU9 1775 aa28.66■■■□□ 2.18
CENPA-201ENST00000233505 SLC4A1APQ9BWU0 796 aaKnown RBP28.65■■■□□ 2.18
CENPA-201ENST00000233505 SYNMO15061 1565 aa28.65■■■□□ 2.18
CENPA-201ENST00000233505 PTPRTO14522 1441 aa28.64■■■□□ 2.18
CENPA-201ENST00000233505 SLC52A1Q9NWF4 448 aa28.64■■■□□ 2.18
CENPA-201ENST00000233505 PKD2Q13563 968 aa28.61■■■□□ 2.17
CENPA-201ENST00000233505 PLA2R1Q13018 1463 aa28.6■■■□□ 2.17
CENPA-201ENST00000233505 UGGT1Q9NYU2 1555 aa28.59■■■□□ 2.17
CENPA-201ENST00000233505 MPHOSPH9Q99550 1183 aa28.59■■■□□ 2.17
CENPA-201ENST00000233505 IDI1Q13907 227 aa28.57■■■□□ 2.16
CENPA-201ENST00000233505 THEMISQ8N1K5 641 aaPredicted RBP28.57■■■□□ 2.16
CENPA-201ENST00000233505 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
CENPA-201ENST00000233505 DMRT2Q9Y5R5 561 aa28.54■■■□□ 2.16
CENPA-201ENST00000233505 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
CENPA-201ENST00000233505 TRPM2O94759 1503 aa28.53■■■□□ 2.16
CENPA-201ENST00000233505 KDM5AP29375 1690 aaKnown RBP28.51■■■□□ 2.16
CENPA-201ENST00000233505 ADGRB3O60242 1522 aa28.51■■■□□ 2.15
CENPA-201ENST00000233505 SPHKAPQ2M3C7 1700 aa28.49■■■□□ 2.15
CENPA-201ENST00000233505 CFAP65Q6ZU64 1925 aaKnown RBP28.49■■■□□ 2.15
CENPA-201ENST00000233505 CERKQ8TCT0 537 aa28.48■■■□□ 2.15
CENPA-201ENST00000233505 UBR1Q8IWV7 1749 aa28.48■■■□□ 2.15
CENPA-201ENST00000233505 ARHGAP23Q9P227 1491 aa28.47■■■□□ 2.15
CENPA-201ENST00000233505 NCKAP5LQ9HCH0 1330 aa28.47■■■□□ 2.15
CENPA-201ENST00000233505 SLIT1O75093 1534 aa28.46■■■□□ 2.15
CENPA-201ENST00000233505 STAG3Q9UJ98 1225 aa28.45■■■□□ 2.14
CENPA-201ENST00000233505 TMEM2Q9UHN6 1383 aa28.44■■■□□ 2.14
CENPA-201ENST00000233505 FOXD1Q16676 465 aa28.42■■■□□ 2.14
CENPA-201ENST00000233505 ANKLE2Q86XL3 938 aa28.42■■■□□ 2.14
CENPA-201ENST00000233505 TMEM131LA2VDJ0 1609 aa28.41■■■□□ 2.14
CENPA-201ENST00000233505 CLTCL1P53675 1640 aa28.39■■■□□ 2.13
CENPA-201ENST00000233505 MED14O60244 1454 aa28.38■■■□□ 2.13
CENPA-201ENST00000233505 CCDC144AA2RUR9 1427 aa28.37■■■□□ 2.13
CENPA-201ENST00000233505 SCAF11Q99590 1463 aaKnown RBP28.37■■■□□ 2.13
CENPA-201ENST00000233505 ZFYVE9O95405 1425 aa28.35■■■□□ 2.13
CENPA-201ENST00000233505 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
CENPA-201ENST00000233505 EID1Q9Y6B2 187 aa28.34■■■□□ 2.13
CENPA-201ENST00000233505 ANKRD30BQ9BXX2 1392 aa28.34■■■□□ 2.13
CENPA-201ENST00000233505 CHGAP10645 457 aaKnown RBP28.33■■■□□ 2.13
CENPA-201ENST00000233505 LTBP4Q8N2S1 1624 aa28.32■■■□□ 2.12
CENPA-201ENST00000233505 LTKP29376 864 aa28.31■■■□□ 2.12
CENPA-201ENST00000233505 TXNDC2Q86VQ3 553 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms