RNA–Protein interactions for RNA: ENST00000227667.7

APOC3-201, Transcript of apolipoprotein C3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC3, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-201ENST00000227667 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
APOC3-201ENST00000227667 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
APOC3-201ENST00000227667 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
APOC3-201ENST00000227667 POLR1AO95602 1720 aaPredicted RBP17.66■□□□□ 0.42
APOC3-201ENST00000227667 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
APOC3-201ENST00000227667 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
APOC3-201ENST00000227667 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 MED14O60244 1454 aa17.63■□□□□ 0.41
APOC3-201ENST00000227667 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
APOC3-201ENST00000227667 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
APOC3-201ENST00000227667 KIF3BO15066 747 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
APOC3-201ENST00000227667 PZPP20742 1482 aa17.6■□□□□ 0.41
APOC3-201ENST00000227667 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
APOC3-201ENST00000227667 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
APOC3-201ENST00000227667 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
APOC3-201ENST00000227667 ZNF644Q9H582 1327 aaPredicted RBP17.57■□□□□ 0.4
APOC3-201ENST00000227667 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
APOC3-201ENST00000227667 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
APOC3-201ENST00000227667 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
APOC3-201ENST00000227667 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
APOC3-201ENST00000227667 IQGAP1P46940 1657 aa17.53■□□□□ 0.4
APOC3-201ENST00000227667 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
APOC3-201ENST00000227667 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.4
APOC3-201ENST00000227667 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 SYNMO15061 1565 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
APOC3-201ENST00000227667 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
APOC3-201ENST00000227667 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
APOC3-201ENST00000227667 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
APOC3-201ENST00000227667 UPF1Q92900 1129 aaKnown RBP eCLIP17.45■□□□□ 0.383e-13■■□□□ 12.2
APOC3-201ENST00000227667 LTKP29376 864 aa17.44■□□□□ 0.38
APOC3-201ENST00000227667 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
APOC3-201ENST00000227667 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
APOC3-201ENST00000227667 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
APOC3-201ENST00000227667 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
APOC3-201ENST00000227667 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
APOC3-201ENST00000227667 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
APOC3-201ENST00000227667 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
APOC3-201ENST00000227667 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
APOC3-201ENST00000227667 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
APOC3-201ENST00000227667 ERVK-7P63135 1459 aa17.37■□□□□ 0.37
APOC3-201ENST00000227667 JCADQ9P266 1359 aa17.36■□□□□ 0.37
APOC3-201ENST00000227667 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
APOC3-201ENST00000227667 KCNA6P17658 529 aa17.35■□□□□ 0.37
APOC3-201ENST00000227667 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
APOC3-201ENST00000227667 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
APOC3-201ENST00000227667 ABCC3O15438 1527 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
APOC3-201ENST00000227667 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.37
APOC3-201ENST00000227667 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.36
APOC3-201ENST00000227667 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
APOC3-201ENST00000227667 SLIT1O75093 1534 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
APOC3-201ENST00000227667 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
APOC3-201ENST00000227667 RXRBP28702 533 aa17.29■□□□□ 0.36
APOC3-201ENST00000227667 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
APOC3-201ENST00000227667 MSH6P52701 1360 aa17.28■□□□□ 0.36
APOC3-201ENST00000227667 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
APOC3-201ENST00000227667 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.36
APOC3-201ENST00000227667 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
APOC3-201ENST00000227667 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
APOC3-201ENST00000227667 BCANQ96GW7 911 aa17.25■□□□□ 0.35
APOC3-201ENST00000227667 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
APOC3-201ENST00000227667 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
APOC3-201ENST00000227667 LRP6O75581 1613 aa17.23■□□□□ 0.35
APOC3-201ENST00000227667 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.34
APOC3-201ENST00000227667 ARHGAP31Q2M1Z3 1444 aa17.2■□□□□ 0.34
APOC3-201ENST00000227667 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
APOC3-201ENST00000227667 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
APOC3-201ENST00000227667 IDI1Q13907 227 aa17.19■□□□□ 0.34
APOC3-201ENST00000227667 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
APOC3-201ENST00000227667 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
APOC3-201ENST00000227667 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
APOC3-201ENST00000227667 TET3O43151 1660 aa17.16■□□□□ 0.34
APOC3-201ENST00000227667 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
APOC3-201ENST00000227667 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
APOC3-201ENST00000227667 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
APOC3-201ENST00000227667 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
APOC3-201ENST00000227667 CEP152O94986 1710 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 AFF2P51816 1311 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
APOC3-201ENST00000227667 ATF3P18847 181 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms