RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 REREQ9P2R6 1566 aa16.4■□□□□ 0.22
CTSC-201ENST00000227266 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
CTSC-201ENST00000227266 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
CTSC-201ENST00000227266 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
CTSC-201ENST00000227266 AGLP35573 1532 aa16.38■□□□□ 0.21
CTSC-201ENST00000227266 KANK1Q14678 1352 aa16.38■□□□□ 0.21
CTSC-201ENST00000227266 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
CTSC-201ENST00000227266 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
CTSC-201ENST00000227266 UNC13BO14795 1591 aa16.36■□□□□ 0.21
CTSC-201ENST00000227266 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
CTSC-201ENST00000227266 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
CTSC-201ENST00000227266 PZPP20742 1482 aa16.35■□□□□ 0.21
CTSC-201ENST00000227266 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
CTSC-201ENST00000227266 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
CTSC-201ENST00000227266 FAM135AQ9P2D6 1515 aa16.34■□□□□ 0.21
CTSC-201ENST00000227266 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
CTSC-201ENST00000227266 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
CTSC-201ENST00000227266 KDM5DQ9BY66 1539 aa16.34■□□□□ 0.21
CTSC-201ENST00000227266 PKD2Q13563 968 aa16.33■□□□□ 0.21
CTSC-201ENST00000227266 FOXD1Q16676 465 aa16.33■□□□□ 0.21
CTSC-201ENST00000227266 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.2
CTSC-201ENST00000227266 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
CTSC-201ENST00000227266 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
CTSC-201ENST00000227266 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
CTSC-201ENST00000227266 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
CTSC-201ENST00000227266 ABCC3O15438 1527 aa16.28■□□□□ 0.2
CTSC-201ENST00000227266 LMTK2Q8IWU2 1503 aa16.26■□□□□ 0.19
CTSC-201ENST00000227266 CEP152O94986 1710 aa16.23■□□□□ 0.19
CTSC-201ENST00000227266 TET3O43151 1660 aa16.23■□□□□ 0.19
CTSC-201ENST00000227266 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
CTSC-201ENST00000227266 NPATQ14207 1427 aa16.22■□□□□ 0.19
CTSC-201ENST00000227266 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
CTSC-201ENST00000227266 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
CTSC-201ENST00000227266 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
CTSC-201ENST00000227266 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.19
CTSC-201ENST00000227266 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
CTSC-201ENST00000227266 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
CTSC-201ENST00000227266 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
CTSC-201ENST00000227266 CLTCQ00610 1675 aaKnown RBP16.2■□□□□ 0.18
CTSC-201ENST00000227266 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
CTSC-201ENST00000227266 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
CTSC-201ENST00000227266 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
CTSC-201ENST00000227266 E9PCH4 1651 aa16.19■□□□□ 0.18
CTSC-201ENST00000227266 FBXO31Q5XUX0 539 aaPredicted RBP16.19■□□□□ 0.18
CTSC-201ENST00000227266 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
CTSC-201ENST00000227266 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
CTSC-201ENST00000227266 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
CTSC-201ENST00000227266 PTPRTO14522 1441 aa16.15■□□□□ 0.18
CTSC-201ENST00000227266 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
CTSC-201ENST00000227266 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
CTSC-201ENST00000227266 FER1L4A9Z1Z3 1794 aa16.14■□□□□ 0.17
CTSC-201ENST00000227266 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
CTSC-201ENST00000227266 NOS1P29475 1434 aa16.13■□□□□ 0.17
CTSC-201ENST00000227266 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
CTSC-201ENST00000227266 TRPM2O94759 1503 aa16.12■□□□□ 0.17
CTSC-201ENST00000227266 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
CTSC-201ENST00000227266 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
CTSC-201ENST00000227266 MROH2AA6NES4 1674 aa16.1■□□□□ 0.17
CTSC-201ENST00000227266 UGGT1Q9NYU2 1555 aa16.1■□□□□ 0.17
CTSC-201ENST00000227266 SPHKAPQ2M3C7 1700 aa16.09■□□□□ 0.17
CTSC-201ENST00000227266 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.17
CTSC-201ENST00000227266 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
CTSC-201ENST00000227266 TNRQ92752 1358 aa16.08■□□□□ 0.16
CTSC-201ENST00000227266 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.16
CTSC-201ENST00000227266 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 IDI1Q13907 227 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 SLC52A1Q9NWF4 448 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 SYNMO15061 1565 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 TONSLQ96HA7 1378 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
CTSC-201ENST00000227266 C3P01024 1663 aa16.06■□□□□ 0.16
CTSC-201ENST00000227266 RGL3Q3MIN7 710 aa16.06■□□□□ 0.16
CTSC-201ENST00000227266 PTPRMP28827 1452 aa16.06■□□□□ 0.16
CTSC-201ENST00000227266 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
CTSC-201ENST00000227266 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
CTSC-201ENST00000227266 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
CTSC-201ENST00000227266 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.15
CTSC-201ENST00000227266 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.15
CTSC-201ENST00000227266 SPATA31E1Q6ZUB1 1445 aa16.01■□□□□ 0.15
CTSC-201ENST00000227266 PIK3C2BO00750 1634 aa16■□□□□ 0.15
CTSC-201ENST00000227266 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
CTSC-201ENST00000227266 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
CTSC-201ENST00000227266 NLRP1Q9C000 1473 aa15.98■□□□□ 0.15
CTSC-201ENST00000227266 ADGRB3O60242 1522 aa15.96■□□□□ 0.15
CTSC-201ENST00000227266 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
CTSC-201ENST00000227266 A2ML1A8K2U0 1454 aa15.94■□□□□ 0.14
CTSC-201ENST00000227266 KIF1BO60333 1816 aa15.94■□□□□ 0.14
CTSC-201ENST00000227266 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
CTSC-201ENST00000227266 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
CTSC-201ENST00000227266 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
CTSC-201ENST00000227266 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
CTSC-201ENST00000227266 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
CTSC-201ENST00000227266 UHRF1BP1Q6BDS2 1440 aa15.92■□□□□ 0.14
CTSC-201ENST00000227266 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
CTSC-201ENST00000227266 CEP170BQ9Y4F5 1589 aaPredicted RBP15.9■□□□□ 0.14
CTSC-201ENST00000227266 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
CTSC-201ENST00000227266 TMEM2Q9UHN6 1383 aa15.89■□□□□ 0.13
CTSC-201ENST00000227266 RIMS2Q9UQ26 1411 aa15.89■□□□□ 0.13
CTSC-201ENST00000227266 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
CTSC-201ENST00000227266 NBPF8Q3BBV2 869 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms