RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 CATSPEREQ5SY80 951 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 FAM83BQ5T0W9 1011 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 CCDC62Q6P9F0 684 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 TOGARAM2Q6ZUX3 1019 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 SIRT2Q8IXJ6 389 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 RBM12BQ8IXT5 1001 aaKnown RBP8.29□□□□□ -1.08
SCARB2-224ENST00000640880 LZTR1Q8N653 840 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 MAP6Q96JE9 813 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 MAP3K14Q99558 947 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 NUB1Q9Y5A7 615 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
SCARB2-224ENST00000640880 NUP155O75694 1391 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 SLC27A2O14975 620 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 BUB1BO60566 1050 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-224ENST00000640880 GJA4P35212 333 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 GJA9P57773 515 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 MOGSQ13724 837 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 UAP1L1Q3KQV9 507 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 STEAP3Q658P3 488 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 ERAP2Q6P179 960 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 ESPNLQ6ZVH7 1005 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 SRGAP1Q7Z6B7 1085 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 FAM43AQ8N2R8 423 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 C7orf31Q8N865 590 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 ENAHQ8N8S7 591 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-224ENST00000640880 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-224ENST00000640880 TNIP3Q96KP6 325 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 RIC8BQ9NVN3 520 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 FBLN5Q9UBX5 448 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 SERPINB13Q9UIV8 391 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 TUBD1Q9UJT1 453 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 PPP2R3BQ9Y5P8 575 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 LMTK2Q8IWU2 1503 aa8.28□□□□□ -1.08
SCARB2-224ENST00000640880 ZNF142P52746 1687 aaPredicted RBP8.27□□□□□ -1.08
SCARB2-224ENST00000640880 VWDEQ8N2E2 1590 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQ45 241 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQY0 241 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 FOXP2O15409 715 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 NRDCO43847 1150 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 TCEA3O75764 348 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 ZBED1O96006 694 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
SCARB2-224ENST00000640880 SDHAP31040 664 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 FXR1P51114 621 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCARB2-224ENST00000640880 INO80DQ53TQ3 878 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-224ENST00000640880 BTBD8Q5XKL5 378 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 OVCH2Q7RTZ1 564 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 KCNK18Q7Z418 384 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-224ENST00000640880 NME9Q86XW9 330 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PPM1NQ8N819 430 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PPP1R35Q8TAP8 253 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 NETO1Q8TDF5 533 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 TP53INP1Q96A56 240 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 DBNDD2Q9BQY9 259 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 PLCB1Q9NQ66 1216 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 E9PCH4 1651 aa8.27□□□□□ -1.09
SCARB2-224ENST00000640880 RPRD2Q5VT52 1461 aaKnown RBP8.26□□□□□ -1.09
SCARB2-224ENST00000640880 SPHKAPQ2M3C7 1700 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 PRAMEF25A6NGN4 478 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 MAFKO60675 156 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 C4BPAP04003 597 aaKnown RBP8.26□□□□□ -1.09
SCARB2-224ENST00000640880 MTHFD2P13995 350 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 TACR1P25103 407 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 TRAPPC10P48553 1259 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 CORO7P57737 925 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 NFIAQ12857 509 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 TUSC3Q13454 348 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 EMC4Q5J8M3 183 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 PITRM1Q5JRX3 1037 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 CCDC149Q6ZUS6 474 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 SRLQ86TD4 932 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
SCARB2-224ENST00000640880 PHYKPLQ8IUZ5 450 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 CAMKK1Q8N5S9 505 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 FAM156AQ8NDB6 213 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 NAA15Q9BXJ9 866 aaKnown RBP8.26□□□□□ -1.09
SCARB2-224ENST00000640880 POFUT1Q9H488 388 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 NLRC4Q9NPP4 1024 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 SPATA31D1Q6ZQQ2 1576 aa8.26□□□□□ -1.09
SCARB2-224ENST00000640880 CEP170BQ9Y4F5 1589 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-224ENST00000640880 TNRQ92752 1358 aa8.25□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQ27 194 aa8.25□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQ64 194 aa8.25□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQC6 194 aa8.25□□□□□ -1.09
SCARB2-224ENST00000640880 A0A1W2PQD8 194 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms