RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SUCLA2Q9P2R7 463 aaPredicted RBP15.46■□□□□ 0.07
PNKP-228ENST00000637325 MGEA5O60502 916 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 MAFO75444 373 aaPredicted RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 MCM7P33993 719 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 POLGP54098 1239 aaPredicted RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 NPEPPSP55786 919 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 CYP4A11Q02928 519 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 DRP2Q13474 957 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 PAN2Q504Q3 1202 aaKnown RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 SLC24A5Q71RS6 500 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 C4orf19Q8IY42 314 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 CMTR2Q8IYT2 770 aaKnown RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 FBXO18Q8NFZ0 1043 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 ATXN2LQ8WWM7 1075 aaKnown RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 SLC7A3Q8WY07 619 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 ZNF689Q96CS4 500 aaPredicted RBP15.45■□□□□ 0.06
PNKP-228ENST00000637325 KIF3AQ9Y496 699 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
PNKP-228ENST00000637325 REV3LO60673 3130 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 IGKV6-21A0A0C4DH24 114 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 H3BNC9 293 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 WNT7AO00755 349 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 RB1P06400 928 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 DARSP14868 501 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 BMPR1AP36894 532 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 ZNF174Q15697 407 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 TJAP1Q5JTD0 557 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 SPOUT1Q5T280 376 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 CCDC43Q96MW1 224 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 EIF2AK1Q9BQI3 630 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 WRAP73Q9P2S5 460 aaPredicted RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 NOL7Q9UMY1 257 aaKnown RBP15.44■□□□□ 0.06
PNKP-228ENST00000637325 ATG2AQ2TAZ0 1938 aa15.44■□□□□ 0.06
PNKP-228ENST00000637325 A0A087WZ62 844 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 C9IYK1 514 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 SLITRK3O94933 977 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 RFC5P40937 340 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 MCM2P49736 904 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 MRPL38Q96DV4 380 aaKnown RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 MTMR9Q96QG7 549 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 FDXACB1Q9BRP7 624 aaPredicted RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 C11orf84Q9BUA3 381 aaPredicted RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 INO80BQ9C086 356 aaPredicted RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 RC3H2Q9HBD1 1191 aaKnown RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 COG5Q9UP83 839 aa15.43■□□□□ 0.06
PNKP-228ENST00000637325 MRPL42Q9Y6G3 142 aaKnown RBP15.43■□□□□ 0.06
PNKP-228ENST00000637325 TBKBP1A7MCY6 615 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 FGFR4P22455 802 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 SFPQP23246 707 aaKnown RBP eCLIP15.42■□□□□ 0.06
PNKP-228ENST00000637325 GATMP50440 423 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 ORC2Q13416 577 aaPredicted RBP15.42■□□□□ 0.06
PNKP-228ENST00000637325 DSC3Q14574 896 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 AAK1Q2M2I8 961 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 TTC38Q5R3I4 469 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 NOSTRINQ8IVI9 506 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 CRIPAKQ8N1N5 446 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
PNKP-228ENST00000637325 TCP11Q8WWU5 503 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 PSPC1Q8WXF1 523 aaKnown RBP15.42■□□□□ 0.06
PNKP-228ENST00000637325 CLP1Q92989 425 aaKnown RBP15.42■□□□□ 0.06
PNKP-228ENST00000637325 TMEM143Q96AN5 459 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 ASB2Q96Q27 587 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
PNKP-228ENST00000637325 TMEM161AQ9NX61 479 aa15.42■□□□□ 0.06
PNKP-228ENST00000637325 C5orf67F2Z3F1 127 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 GAS2O43903 313 aaKnown RBP15.41■□□□□ 0.06
PNKP-228ENST00000637325 CSDE1O75534 798 aaKnown RBP15.41■□□□□ 0.06
PNKP-228ENST00000637325 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 TECP42680 631 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 TRAPPC10P48553 1259 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 FAM189BP81408 668 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 TIGD5Q53EQ6 642 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 FAM102BQ5T8I3 360 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 KSR1Q8IVT5 923 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 HLA-CQ95604 372 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 MTRQ99707 1265 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 HSD17B14Q9BPX1 270 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 PLVAPQ9BX97 442 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 DHX33Q9H6R0 707 aaKnown RBP15.41■□□□□ 0.06
PNKP-228ENST00000637325 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
PNKP-228ENST00000637325 AAASQ9NRG9 546 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 DACT1Q9NYF0 836 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 PLXNA4Q9HCM2 1894 aa15.41■□□□□ 0.06
PNKP-228ENST00000637325 TTC28Q96AY4 2481 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms