RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 COLGALT1Q8NBJ5 622 aa17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 NSUN7Q8NE18 718 aaKnown RBP17.56■□□□□ 0.4
SNRNP48-203ENST00000634363 TMEM221A6NGB7 291 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 LOC730098B7Z3J9 87 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 M0R296 226 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 MCM2P49736 904 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 PLPP4Q5VZY2 271 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 TRIM67Q6ZTA4 783 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 BBXQ8WY36 941 aaPredicted RBP17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 SAMM50Q9Y512 469 aa17.55■□□□□ 0.4
SNRNP48-203ENST00000634363 IGLV3-22A0A075B6J6 115 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 GPR32O75388 356 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 C22orf31O95567 290 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 PSAPP07602 524 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 ZXDAP98168 799 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 LLGL2Q6P1M3 1020 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 ZNF668Q96K58 619 aaPredicted RBP17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 CWH43Q9H720 699 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 PUF60Q9UHX1 559 aaKnown RBP17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 AKT3Q9Y243 479 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 TECTAO75443 2155 aa17.54■□□□□ 0.4
SNRNP48-203ENST00000634363 JAK2O60674 1132 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 DTNBO60941 627 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 CYP3A4P08684 503 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 CLCN3P51790 818 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 FAM189BP81408 668 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 DUSP6Q16828 381 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 PRR16Q569H4 304 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 IER5LQ5T953 404 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 PDE12Q6L8Q7 609 aaKnown RBP17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 ZNF746Q6NUN9 644 aaPredicted RBP17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 RNF169Q8NCN4 708 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 VN1R2Q8NFZ6 395 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 ENTPD7Q9NQZ7 604 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 PCDHA4Q9UN74 947 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 MAFBQ9Y5Q3 323 aaPredicted RBP17.53■□□□□ 0.4
SNRNP48-203ENST00000634363 LAG3P18627 525 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 TECP42680 631 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 TRIM29Q14134 588 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 FAM43BQ6ZT52 329 aaPredicted RBP17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 BMP8AQ7Z5Y6 402 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 ABI1Q8IZP0 508 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 LRRC71Q8N4P6 559 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 RASGRP4Q8TDF6 673 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 TCF25Q9BQ70 676 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 ELAC1Q9H777 363 aaKnown RBP17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 WDR81Q562E7 1941 aa17.52■□□□□ 0.4
SNRNP48-203ENST00000634363 MAGEB2O15479 319 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 SRGAP2BP0DMP2 458 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 TMOD1P28289 359 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 PBX3P40426 434 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 KRT17Q04695 432 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 DSC3Q14574 896 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 KCNT2Q6UVM3 1135 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 SMAP1Q8IYB5 467 aaPredicted RBP17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 BLIDQ8IZY5 108 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 DAGLBQ8NCG7 672 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 CRYGNQ8WXF5 182 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 CASD1Q96PB1 797 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 PHOX2BQ99453 314 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 TMEM117Q9H0C3 514 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 BRMS1Q9HCU9 246 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
SNRNP48-203ENST00000634363 ZNF318Q5VUA4 2279 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 FSD2A1L4K1 749 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 HIDE1A8MVS5 230 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 FSCN2O14926 492 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 FDPSP14324 419 aaKnown RBP17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 ATF7P17544 494 aaPredicted RBP17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 CA8P35219 290 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 CBX2Q14781 532 aaPredicted RBP17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 TMC7Q7Z402 723 aa17.5■□□□□ 0.39
SNRNP48-203ENST00000634363 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms