RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 EGFRP00533 1210 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 STAT1P42224 750 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 RASA3Q14644 834 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 ZSCAN26Q16670 478 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 VPS36Q86VN1 386 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 GLYCTKQ8IVS8 523 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 LRRC57Q8N9N7 239 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 PCIF1Q9H4Z3 704 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 NENFQ9UMX5 172 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 TMEM150BA6NC51 233 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 K7ENM7 598 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 KIF4AO95239 1232 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 SOX5P35711 763 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 GLE1Q53GS7 698 aaKnown RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TSEN2Q8NCE0 465 aaKnown RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TAF4BQ92750 862 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 STRA6Q9BX79 667 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 PPP1R37O75864 691 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 HEXIM1O94992 359 aaKnown RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 FERP16591 822 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 EPHB4P54760 987 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TRADDQ15628 312 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 KLHL7Q8IXQ5 586 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 RUBCNQ92622 972 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 ZBED3Q96IU2 234 aaPredicted RBP13.04□□□□□ -0.32
TP53-227ENST00000622645 STK33Q9BYT3 514 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
TP53-227ENST00000622645 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 LRRN2O75325 713 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 P4HBP07237 508 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 DLG4P78352 724 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 SPP2Q13103 211 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 ARHGAP44Q17R89 818 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 INTS2Q9H0H0 1204 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 UBE4BO95155 1302 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 PSME4Q14997 1843 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 CEP104O60308 925 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 FAM153BP0C7A2 387 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 BCRP11274 1271 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 ACTN2P35609 894 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 RARRES1P49788 294 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 GALCP54803 685 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 BFSP1Q12934 665 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 FAM153CQ494X1 144 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 PHLDB3Q6NSJ2 640 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 IFT20Q8IY31 132 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 AFAP1L1Q8TED9 768 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
TP53-227ENST00000622645 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 FAM153AQ9UHL3 310 aa13.03□□□□□ -0.32
TP53-227ENST00000622645 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.32
TP53-227ENST00000622645 MYL7Q01449 175 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 MTMR1Q13613 665 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 PPP2R5AQ15172 486 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.32
TP53-227ENST00000622645 METTL13Q8N6R0 699 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 CBWD1Q9BRT8 395 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 LARSQ9P2J5 1176 aaKnown RBP13.02□□□□□ -0.32
TP53-227ENST00000622645 APEX2Q9UBZ4 518 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.32
TP53-227ENST00000622645 RAD51CO43502 376 aa13.02□□□□□ -0.33
TP53-227ENST00000622645 ABCB4P21439 1286 aa13.02□□□□□ -0.33
TP53-227ENST00000622645 ANXA13P27216 316 aa13.02□□□□□ -0.33
TP53-227ENST00000622645 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms