RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 EMSYQ7Z589 1322 aa17.54■□□□□ 0.4
CBWD3-216ENST00000621396 H3BRB1 525 aa17.54■□□□□ 0.4
CBWD3-216ENST00000621396 PES1O00541 588 aaKnown RBP17.54■□□□□ 0.4
CBWD3-216ENST00000621396 IGHA2P01877 340 aa17.54■□□□□ 0.4
CBWD3-216ENST00000621396 FILIP1Q7Z7B0 1213 aa17.54■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF296Q8WUU4 475 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-216ENST00000621396 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-216ENST00000621396 TUT1Q9H6E5 874 aaKnown RBP17.54■□□□□ 0.4
CBWD3-216ENST00000621396 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 PPFIA4O75335 1185 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 TBC1D8BQ0IIM8 1120 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 HAUS6Q7Z4H7 955 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 METTL13Q8N6R0 699 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 ZNF507Q8TCN5 953 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 PPP1R16BQ96T49 567 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 ZMYM2Q9UBW7 1377 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 MYADML2A6NDP7 307 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 TULP1O00294 542 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 PTMAP06454 111 aaKnown RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 INSRRP14616 1297 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 CACNB2Q08289 660 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 LRRC55Q6ZSA7 311 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 ASAP3Q8TDY4 903 aa17.53■□□□□ 0.4
CBWD3-216ENST00000621396 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
CBWD3-216ENST00000621396 PGK1P00558 417 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
CBWD3-216ENST00000621396 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.4
CBWD3-216ENST00000621396 MKRN4PQ13434 485 aaPredicted RBP17.52■□□□□ 0.4
CBWD3-216ENST00000621396 ARID5BQ14865 1188 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 DGKDQ16760 1214 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 NR2F2P24468 414 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 ADAM9Q13443 819 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 MCPH1Q8NEM0 835 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 KMT5AQ9NQR1 393 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 SEL1LQ9UBV2 794 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.4
CBWD3-216ENST00000621396 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
CBWD3-216ENST00000621396 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
CBWD3-216ENST00000621396 GLRA2P23416 452 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 PPP1R2P41236 205 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 CLCN3P51790 818 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 TSG101Q99816 390 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 DENND3A2RUS2 1198 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 LRRIQ4A6NIV6 560 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 PPP1R37O75864 691 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 CYBAP13498 195 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 CASP4P49662 377 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 ZSWIM2Q8NEG5 633 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
CBWD3-216ENST00000621396 PRPF31Q8WWY3 499 aaKnown RBP17.51■□□□□ 0.39
CBWD3-216ENST00000621396 KIFAP3Q92845 792 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 STRA6Q9BX79 667 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
CBWD3-216ENST00000621396 THAP9Q9H5L6 903 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 PCDHB13Q9Y5F0 798 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 ARID2Q68CP9 1835 aa17.51■□□□□ 0.39
CBWD3-216ENST00000621396 A6NJR5 290 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 N4BP3O15049 544 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 SRGAP2CP0DJJ0 459 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 RDH13Q8NBN7 331 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 FAM167AQ96KS9 214 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 PCIF1Q9H4Z3 704 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 LOXHD1Q8IVV2 1947 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 HBP1O60381 514 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 CSDE1O75534 798 aaKnown RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 AKR1A1P14550 325 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 NR1I3Q14994 352 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 BMT2Q1RMZ1 405 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 CEP135Q66GS9 1140 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 EFCAB12Q6NXP0 572 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 TUBGCP2Q9BSJ2 902 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 SETD4Q9NVD3 440 aa17.5■□□□□ 0.39
CBWD3-216ENST00000621396 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
CBWD3-216ENST00000621396 A0A1B0GTH6 734 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 EIF3DO15371 548 aaKnown RBP eCLIP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 ADCY3O60266 1144 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 KIF20AO95235 890 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 MYL3P08590 195 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 KLRC1P26715 233 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 MTIF2P46199 727 aaKnown RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 CYP2J2P51589 502 aa17.49■□□□□ 0.39
CBWD3-216ENST00000621396 COPB1P53618 953 aaKnown RBP17.49■□□□□ 0.39
CBWD3-216ENST00000621396 SMTNP53814 917 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms