RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PPIDQ08752 370 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 KPNB1Q14974 876 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 RFWD2Q8NHY2 731 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 RAB20Q9NX57 234 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TTLL3Q9Y4R7 772 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 MYL1P05976 194 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 INHBAP08476 426 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 KCNJ1P48048 391 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 HERVK_113P62684 666 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 LMNB2Q03252 620 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ANKRD40Q6AI12 368 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 PIDD1Q9HB75 910 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 FGD5Q6ZNL6 1462 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 H7C0C1 242 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TAF4O00268 1085 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ABL1P00519 1130 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ATP5OP48047 213 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TRAPPC11Q7Z392 1133 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CADPS2Q86UW7 1296 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 DHTKD1Q96HY7 919 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 BBS2Q9BXC9 721 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ANKRD2Q9GZV1 360 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 RABL2AQ9UBK7 228 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 FAM135BQ49AJ0 1406 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 MAGI2Q86UL8 1455 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 IL13P35225 146 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 GSCP56915 257 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 MDM2Q00987 491 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 RBM44Q6ZP01 1051 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 SCG2P13521 617 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC125Q86Z20 511 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TMTC2Q8N394 836 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 C1orf232A0A0U1RR37 186 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ADCY6O43306 1168 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ALOX15P16050 662 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 USP46P62068 366 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 SAPCD2Q86UD0 394 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ZNF654Q8IZM8 581 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 FANCBQ8NB91 859 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TUBB6Q9BUF5 446 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 PUS3Q9BZE2 481 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 TOR3AQ9H497 397 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 NOL6Q9H6R4 1146 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 PIK3C2GO75747 1445 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 FOSL2P15408 326 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 VHLP40337 213 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 GNGT2O14610 69 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CDC37Q16543 378 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 MIS18BP1Q6P0N0 1132 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 SDR42E1Q8WUS8 393 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 SMAD5Q99717 465 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 HAUS7Q99871 368 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 EIF3BP55884 814 aaKnown RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 SNAP25P60880 206 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 GET4Q7L5D6 327 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-214ENST00000620676 LPCAT2Q7L5N7 544 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ZNF786Q8N393 782 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 NFATC2IPQ8NCF5 419 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 ARMCX1Q9P291 453 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 EPS15L1Q9UBC2 864 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 GOLGA8QA0A0J9YX86 632 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 FAM196BA6NMK8 535 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CHL1O00533 1208 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 MAP2K7O14733 419 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CHRNA2Q15822 529 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 CRLF3Q8IUI8 442 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 DACH2Q96NX9 599 aa5.38□□□□□ -1.55
VPS13D-214ENST00000620676 UBE2Q2LH0YL09 131 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ATMINO43313 823 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ACADSP16219 412 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TCHHL1Q5QJ38 904 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CCDC24Q8N4L8 307 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 FAM89AQ96GI7 184 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ACAP3Q96P50 834 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TYW1Q9NV66 732 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NOS1P29475 1434 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PLIN5Q00G26 463 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 MED21Q13503 144 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ITIH4Q14624 930 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 LRIG3Q6UXM1 1119 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RAPH1Q70E73 1250 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KBTBD3Q8NAB2 608 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 C2orf71A6NGG8 1288 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KRT81Q14533 505 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NEK10Q6ZWH5 1172 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ANKRD27Q96NW4 1050 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ZSCAN10Q96SZ4 725 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CCSER1Q9C0I3 900 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 STX18Q9P2W9 335 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 MAPK4P31152 587 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PLEKHA7Q6IQ23 1121 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 BNIPLQ7Z465 357 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NUP93Q8N1F7 819 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms