RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 GAKO14976 1311 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 NDUFAB1O14561 156 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CTIFO43310 598 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TCP1P17987 556 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SEL1L2Q5TEA6 688 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 C11orf70Q9BRQ4 267 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 WDR18Q9BV38 432 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 KRT14P02533 472 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MYL1P05976 194 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 VCAM1P19320 739 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 DAB2IPQ5VWQ8 1189 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TMEM270Q6UE05 265 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CPA5Q8WXQ8 436 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 AS3MTQ9HBK9 375 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PSMD2Q13200 908 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MTMR9Q96QG7 549 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ACCSQ96QU6 501 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 AGTPBP1Q9UPW5 1226 aa16.05■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SLITRK3O94933 977 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 EYA4O95677 639 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 KCTD2Q14681 263 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CYP4F22Q6NT55 531 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FAM160B2Q86V87 743 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CCDC170Q8IYT3 715 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TRIM6Q9C030 488 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TTLL3Q9Y4R7 772 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RIPK3Q9Y572 518 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PI4K2BG5E9Z4 385 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 THAP12O43422 761 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 P4HBP07237 508 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GNGT1P63211 74 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CDO1Q16878 200 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SPOPLQ6IQ16 392 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SMAP1Q8IYB5 467 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 XXYLT1Q8NBI6 393 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 UTP11Q9Y3A2 253 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FOXN3O00409 490 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ENTPD3O75355 529 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZSCAN20P17040 1043 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 VAMP7P51809 220 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GALCP54803 685 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 DLG4P78352 724 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 BRD3Q15059 726 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 USP37Q86T82 979 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TRAPPC12Q8WVT3 735 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CEP72Q9P209 647 aa16.04■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SASH3O75995 380 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MAP3K6O95382 1288 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GABPAQ06546 454 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TBX2Q13207 712 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZSWIM2Q8NEG5 633 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ADM5C9JUS6 153 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CETN2P41208 172 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CCT5P48643 541 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PDE6CP51160 858 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CALCOCO2Q13137 446 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PSMD1Q99460 953 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TRIM51Q9BSJ1 452 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TARS2Q9BW92 718 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 EXOC7Q9UPT5 735 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PDE2AO00408 941 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PDCLQ13371 301 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TERF2Q15554 542 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TMEM139Q8IV31 216 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 INTS2Q9H0H0 1204 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SUGT1Q9Y2Z0 365 aa16.03■□□□□ 0.16
TNFRSF11A-206ENST00000617039 WDR64B1ANS9 1081 aa16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 VIMP08670 466 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FGRP09769 529 aa16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 AADACL2Q6P093 401 aa16.02■□□□□ 0.16
TNFRSF11A-206ENST00000617039 B4GALNT4Q76KP1 1039 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms