RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 BMT2Q1RMZ1 405 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ZCWPW2Q504Y3 356 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 XKR9Q5GH70 373 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 STXBP4Q6ZWJ1 553 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ANO5Q75V66 913 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 EEPD1Q7L9B9 569 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 CCDC60Q8IWA6 550 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 NELFCDQ8IXH7 590 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 CACTINQ8WUQ7 758 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 VPS16Q9H269 839 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 POLD4Q9HCU8 107 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 TAB2Q9NYJ8 693 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 LARSQ9P2J5 1176 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 PDXKO00764 312 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 BACH1O14867 736 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 ZNF862O60290 1169 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 FARP2O94887 1054 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 STBD1O95210 358 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 GCNT3O95395 438 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 GNA14O95837 355 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MYBP10242 640 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MAPK4P31152 587 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 PBX1P40424 430 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 CASP5P51878 434 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 TBX2Q13207 712 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 KNOP1Q1ED39 458 aaKnown RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 EDRF1Q3B7T1 1238 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 ZNF792Q3KQV3 632 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 ODR4Q5SWX8 454 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 UTP14CQ5TAP6 766 aaKnown RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 LRRC55Q6ZSA7 311 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 ZNF720Q7Z2F6 126 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 FAM178BQ8IXR5 827 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 DAW1Q8N136 415 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 CEP63Q96MT8 703 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 TUBGCP2Q9BSJ2 902 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MLXIPQ9HAP2 919 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 ZNF302Q9NR11 478 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 TELO2Q9Y4R8 837 aa9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-207ENST00000612558 MCM3APO60318 1980 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 UBE4BO95155 1302 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 SYNGAP1Q96PV0 1343 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 IGSF9BQ9UPX0 1349 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 IGKV6D-21A0A0A0MT36 114 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 LGALS16A8MUM7 142 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 CALUO43852 315 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 ZNF500O60304 480 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 SORBS3O60504 671 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 USO1O60763 962 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 PRPF6O94906 941 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 GGPS1O95749 300 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 SLC10A3P09131 477 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 NMT1P30419 496 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 HOXD13P35453 343 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 DNM2P50570 870 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 NPEPPSP55786 919 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 UBXN1Q04323 297 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 LRMPQ12912 555 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 MAPK7Q13164 816 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 GRB14Q14449 540 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 ARID5BQ14865 1188 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 LY6KQ17RY6 165 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 XKR3Q5GH77 459 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 ARMCX5Q6P1M9 558 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 GPR142Q7Z601 462 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 ZC3H3Q8IXZ2 948 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 SEPT1Q8WYJ6 367 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 EEF2KMTQ96G04 330 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 CEP170P1Q96L14 293 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 DRC1Q96MC2 740 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 FIZ1Q96SL8 496 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 SPSB2Q99619 263 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 GPBP1L1Q9HC44 474 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 TYW1Q9NV66 732 aaKnown RBP9.82□□□□□ -0.84
CCDC47-207ENST00000612558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.82□□□□□ -0.846e-9■■□□□ 12
CCDC47-207ENST00000612558 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 ITIH6Q6UXX5 1313 aa9.82□□□□□ -0.84
CCDC47-207ENST00000612558 LRRC37A2A6NM11 1700 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PLXNB2O15031 1838 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 A0A1W2PQC6 194 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 GSTTP1A0A1W2PQM5 241 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 TMEM150BA6NC51 233 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 CETN3O15182 167 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 NRDCO43847 1150 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PLS3P13797 630 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PRKCSHP14314 528 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 RPL13P26373 211 aaKnown RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PRKCEQ02156 737 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 ADAM9Q13443 819 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms