RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 SFI1A8K8P3 1242 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 FLOT1O75955 427 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 GM2AP17900 193 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 BNIP1Q12981 228 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 BRIP1Q9BX63 1249 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 LRRN2O75325 713 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 STAT3P40763 770 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 RWDD2BP57060 319 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 USP4Q13107 963 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 DUPD1Q68J44 220 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 TGS1Q96RS0 853 aaKnown RBP16.68■□□□□ 0.26
RER1-209ENST00000605895 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
RER1-209ENST00000605895 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 INTUQ9ULD6 942 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
RER1-209ENST00000605895 KIAA0391O15091 583 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 KCNA1Q09470 495 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 HP1BP3Q5SSJ5 553 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 RBM26Q5T8P6 1007 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 CLEC10AQ8IUN9 316 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 REXO1Q8N1G1 1221 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 CEP120Q8N960 986 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 NUDCD1Q96RS6 583 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 GOLGA6L10A0A0M3HER8 536 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 POTEB3A0JP26 581 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 POTECB2RU33 542 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 ATMINO43313 823 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 PON1P27169 355 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 STX2P32856 288 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 PRPHP41219 470 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 POU5F1Q01860 360 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 TTC27Q6P3X3 843 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 POTEBQ6S5H4 581 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 CAPN12Q6ZSI9 719 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 MIGA2Q7L4E1 593 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 GPBP1Q86WP2 473 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 SRRM1Q8IYB3 904 aaKnown RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 CENPTQ96BT3 561 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 ERP27Q96DN0 273 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 FAM118BQ9BPY3 351 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 CBX6O95503 412 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
RER1-209ENST00000605895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.67■□□□□ 0.262e-9■■■■■ 81.6
RER1-209ENST00000605895 BTBD6Q96KE9 485 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 THAP2Q9H0W7 228 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
RER1-209ENST00000605895 SPAG7O75391 227 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 EPHB2P29323 1055 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 PPP1R2P41236 205 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 RANBP1P43487 201 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 C6orf118Q5T5N4 469 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 ZDHHC14Q8IZN3 488 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 PHC3Q8NDX5 983 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 DNAJC19Q96DA6 116 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 IFT74Q96LB3 600 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 ARHGEF3Q9NR81 526 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 CETN3O15182 167 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 RPS6KA3P51812 740 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 DIXDC1Q155Q3 683 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 ECHDC2Q86YB7 292 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 CYP4X1Q8N118 509 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 LNX1Q8TBB1 728 aaPredicted RBP16.66■□□□□ 0.26
RER1-209ENST00000605895 FBF1Q8TES7 1133 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 PGM2Q96G03 612 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 TXLNGYQ9BZA5 131 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 MAGEF1Q9HAY2 307 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 RIC8AQ9NPQ8 531 aa16.66■□□□□ 0.26
RER1-209ENST00000605895 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
RER1-209ENST00000605895 RIPK2O43353 540 aa16.65■□□□□ 0.26
RER1-209ENST00000605895 BRAFP15056 766 aa16.65■□□□□ 0.26
RER1-209ENST00000605895 CTTNQ14247 550 aaKnown RBP16.65■□□□□ 0.26
RER1-209ENST00000605895 ZCWPW2Q504Y3 356 aa16.65■□□□□ 0.26
RER1-209ENST00000605895 MAPKAPK5Q8IW41 473 aa16.65■□□□□ 0.26
RER1-209ENST00000605895 SYN2Q92777 582 aaPredicted RBP16.65■□□□□ 0.26
RER1-209ENST00000605895 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
RER1-209ENST00000605895 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
RER1-209ENST00000605895 DDX50Q9BQ39 737 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms