RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
VRK3-215ENST00000599138 NBR1Q14596 966 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 OTUD6AQ7L8S5 288 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 TPH2Q8IWU9 490 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 EXOC8Q8IYI6 725 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 CEP170P1Q96L14 293 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 RGS18Q9NS28 235 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 SUCLA2Q9P2R7 463 aaPredicted RBP10.85□□□□□ -0.67
VRK3-215ENST00000599138 NOL7Q9UMY1 257 aaKnown RBP10.85□□□□□ -0.67
VRK3-215ENST00000599138 SMC3Q9UQE7 1217 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
VRK3-215ENST00000599138 NLRC5Q86WI3 1866 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 C9IYK1 514 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 GAS2O43903 313 aaKnown RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 TECP42680 631 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 SARSP49591 514 aaKnown RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
VRK3-215ENST00000599138 GRB10Q13322 594 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 ZNF410Q86VK4 478 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 CATSPER3Q86XQ3 398 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 ZNF668Q96K58 619 aaPredicted RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 SAMD11Q96NU1 681 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 ADAM2Q99965 735 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 C17orf80Q9BSJ5 609 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 TUFT1Q9NNX1 390 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 C1orf112Q9NSG2 853 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 ANKEF1Q9NU02 776 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 PCDHB6Q9Y5E3 794 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 RALGAPA2Q2PPJ7 1873 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 FNDC1Q4ZHG4 1894 aaPredicted RBP10.84□□□□□ -0.67
VRK3-215ENST00000599138 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
VRK3-215ENST00000599138 REV3LO60673 3130 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 BDP1A6H8Y1 2624 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 VCANP13611 3396 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 A0A087WZ62 844 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 LAD1O00515 517 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 MED24O75448 989 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 STAG3L1P0CL83 205 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 IGFBP4P22692 258 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 RPA1P27694 616 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 RARRES1P49788 294 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 PTGDRQ13258 359 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 PDIA5Q14554 519 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 EMC2Q15006 297 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 LARP1BQ659C4 914 aaKnown RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 RHPN2Q8IUC4 686 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 PRPF31Q8WWY3 499 aaKnown RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 FDXACB1Q9BRP7 624 aaPredicted RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
VRK3-215ENST00000599138 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 LMCD1Q9NZU5 365 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
VRK3-215ENST00000599138 DENND3A2RUS2 1198 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 C5orf67F2Z3F1 127 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 H3BQV1 296 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 ASAP2O43150 1006 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 DGAT1O75907 488 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 MUTP22033 750 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 PRPHP41219 470 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 LAMTOR4Q0VGL1 99 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 IL17AQ16552 155 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 EPC2Q52LR7 807 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 MCTP1Q6DN14 999 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 FERMT3Q86UX7 667 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 KSR1Q8IVT5 923 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 TMEM192Q8IY95 271 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 CMTR2Q8IYT2 770 aaKnown RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 FIBCD1Q8N539 461 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 SLC17A8Q8NDX2 589 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 GDPD5Q8WTR4 605 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 INTS4Q96HW7 963 aaKnown RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 MTRQ99707 1265 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 TRAIPQ9BWF2 469 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 INO80BQ9C086 356 aaPredicted RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 CHST12Q9NRB3 414 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 RNF216Q9NWF9 866 aaPredicted RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 DBR1Q9UK59 544 aaKnown RBP10.82□□□□□ -0.68
VRK3-215ENST00000599138 MTUS1Q9ULD2 1270 aa10.82□□□□□ -0.68
VRK3-215ENST00000599138 A0A087WWV3 80 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms