RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 LSAMPQ13449 338 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 TMEM53Q6P2H8 277 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 FAM136AQ96C01 138 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 TIPINQ9BVW5 301 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 PDP2Q9P2J9 529 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 IFNAR1P17181 557 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 IL17AQ16552 155 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 ZNF658Q5TYW1 1059 aaPredicted RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 DDX47Q9H0S4 455 aaKnown RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 SUCLA2Q9P2R7 463 aaPredicted RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 TDRKHQ9Y2W6 561 aaKnown RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 E7ENQ6 273 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 PDE6CP51160 858 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 FITM2Q8N6M3 262 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 LRRC8CQ8TDW0 803 aa16.5■□□□□ 0.23
TRPM4-211ENST00000598697 NMD3Q96D46 503 aaKnown RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRPM4-211ENST00000598697 GM2AP17900 193 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 NFKBIAP25963 317 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 LRRC14Q15048 493 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 MEA1Q16626 185 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
TRPM4-211ENST00000598697 TMEM237Q96Q45 408 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 ATP8A1Q9Y2Q0 1164 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 ZNF532Q9HCE3 1301 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 A6NJR5 290 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 H7C1D1 291 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 PRLRP16471 622 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 SLCO1A2P46721 670 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 GALK1P51570 392 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 ADARP55265 1226 aaKnown RBP16.49■□□□□ 0.23
TRPM4-211ENST00000598697 IGBP1P78318 339 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 MPP4Q96JB8 637 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 ARMT1Q9H993 441 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 INIPQ9NRY2 104 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 COMMD3-BMI1R4GMX3 469 aa16.49■□□□□ 0.23
TRPM4-211ENST00000598697 LRRC53A6NM62 1247 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 DAPK3O43293 454 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 WFS1O76024 890 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 ASLP04424 464 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 CYP1A1P04798 512 aaPredicted RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 WTAPQ15007 396 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SCG3Q8WXD2 468 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SLC5A1P13866 664 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 DNM2P50570 870 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 VSIG1Q86XK7 387 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PDCD7Q8N8D1 485 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 CENPKQ9BS16 269 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.236e-7■■■■■ 27.3
TRPM4-211ENST00000598697 SLIT2O94813 1529 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 KCNK3O14649 394 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SRGNP10124 158 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 GALNTL6Q49A17 601 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 WASF1Q92558 559 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 UTP4Q969X6 686 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 CLIP3Q96DZ5 547 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SRPK1Q96SB4 655 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 NAPBQ9H115 298 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 GPCPD1Q9NPB8 672 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 CIDEBQ9UHD4 219 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
TRPM4-211ENST00000598697 SLC4A7Q9Y6M7 1214 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
TRPM4-211ENST00000598697 PLCH1Q4KWH8 1693 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
TRPM4-211ENST00000598697 NTSR2O95665 410 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 FCER1AP12319 257 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 VARSP26640 1264 aaKnown RBP16.47■□□□□ 0.23
TRPM4-211ENST00000598697 COPB2P35606 906 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 ANKRD40Q6AI12 368 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 ASRGL1Q7L266 308 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
TRPM4-211ENST00000598697 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 HSFX1Q9UBD0 423 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
TRPM4-211ENST00000598697 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms