RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 RBL2Q08999 1139 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 BFSP2Q13515 415 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 FAM102BQ5T8I3 360 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 LRRC71Q8N4P6 559 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 DNAJC19Q96DA6 116 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 ZBTB10Q96DT7 871 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
DNMT1-218ENST00000589294 PVALEFA0A1B0GWK0 134 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 HIP1RO75146 1068 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 CLTBP09497 229 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 AFMP43652 599 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 CLCN3P51790 818 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 LAMTOR4Q0VGL1 99 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 DAW1Q8N136 415 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 GPT2Q8TD30 523 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 STAMQ92783 540 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 REEP2Q9BRK0 252 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 NTPCRQ9BSD7 190 aaKnown RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 POLR3FQ9H1D9 316 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
DNMT1-218ENST00000589294 AKT3Q9Y243 479 aa13.48□□□□□ -0.25
DNMT1-218ENST00000589294 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 KIAA0355O15063 1070 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
DNMT1-218ENST00000589294 PLS3P13797 630 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 GAP43P17677 238 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 SCP2P22307 547 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 THPOP40225 353 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 ZNF131P52739 623 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 MAPK7Q13164 816 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 DRP2Q13474 957 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 TFDP1Q14186 410 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 SKOR2Q2VWA4 1001 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-218ENST00000589294 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 ZNF410Q86VK4 478 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 RHPN2Q8IUC4 686 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 DHX38Q92620 1227 aaKnown RBP13.47□□□□□ -0.25
DNMT1-218ENST00000589294 PARVGQ9HBI0 331 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 GPRC5CQ9NQ84 441 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 SEL1LQ9UBV2 794 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 TBX21Q9UL17 535 aa13.47□□□□□ -0.25
DNMT1-218ENST00000589294 TRIP12Q14669 1992 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 M0QZ92 97 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 GPR32O75388 356 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 FAM13AO94988 1023 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SMC2O95347 1197 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 CKBP12277 381 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 GLRA2P23416 452 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 NAMPTP43490 491 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SMTNP53814 917 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 NLRP11P59045 1033 aaKnown RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 MRPS6P82932 125 aaKnown RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 DPYDQ12882 1025 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 CUL4BQ13620 913 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 POSTNQ15063 836 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 FAM43BQ6ZT52 329 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 UNC13DQ70J99 1090 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 GRAMD1CQ8IYS0 662 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 MYCT1Q8N699 235 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SLC17A8Q8NDX2 589 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SPIRE2Q8WWL2 714 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 WNT8BQ93098 351 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 NFKBIZQ9BYH8 718 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 CELF4Q9BZC1 486 aaKnown RBP13.46□□□□□ -0.25
DNMT1-218ENST00000589294 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 POLD4Q9HCU8 107 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SQORQ9Y6N5 450 aa13.46□□□□□ -0.25
DNMT1-218ENST00000589294 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 H0YCG3 227 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 EVI5O60447 810 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 TIMP1P01033 207 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 VTNP04004 478 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 SRGAP2CP0DJJ0 459 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 MAPTP10636 758 aaKnown RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 IDEP14735 1019 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms