RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 GOLGA6L9A6NEM1 432 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 CLIC2O15247 247 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 DKC1O60832 514 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 CCDC175P0C221 793 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 SUPT20HL2P0C7V6 817 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 EPB41P11171 864 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 RPL13P26373 211 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ICAM3P32942 547 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MAP2K2P36507 400 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ACTR2P61160 394 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ERVK-24P63145 666 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ZBED6P86452 979 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 KCNA1Q09470 495 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 UTP14CQ5TAP6 766 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 CYP4F22Q6NT55 531 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MIS18BP1Q6P0N0 1132 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 SEPT14Q6ZU15 432 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ZNF720Q7Z2F6 126 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TRMT1LQ7Z2T5 733 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 FRMD5Q7Z6J6 570 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 KSR1Q8IVT5 923 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TRIM59Q8IWR1 403 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 DAW1Q8N136 415 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MYRIPQ8NFW9 859 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 SMCR8Q8TEV9 937 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 DRC1Q96MC2 740 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MMP19Q99542 508 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TIPINQ9BVW5 301 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 LSM14BQ9BX40 385 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TTYH3Q9C0H2 523 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MMRN2Q9H8L6 949 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TXNRD2Q9NNW7 524 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 FAM207AQ9NSI2 230 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 ZNHIT6Q9NWK9 470 aaKnown RBP9.63□□□□□ -0.87
SMAD4-206ENST00000588860 FAM184BQ9ULE4 1060 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 PAXBP1Q9Y5B6 917 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 EVPLQ92817 2033 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 MYH10P35580 1976 aa9.63□□□□□ -0.87
SMAD4-206ENST00000588860 TGFB1I1O43294 461 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 TUBB4AP04350 444 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
SMAD4-206ENST00000588860 PLS3P13797 630 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 CYP2J2P51589 502 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 NPEPPSP55786 919 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 PRKCEQ02156 737 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 NFIL3Q16649 462 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 FIGNQ5HY92 759 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 WDR78Q5VTH9 848 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 SWSAP1Q6NVH7 229 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 SYT10Q6XYQ8 523 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 OTUD6AQ7L8S5 288 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 SYCP3Q8IZU3 236 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 KIF18AQ8NI77 898 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 FIZ1Q96SL8 496 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
SMAD4-206ENST00000588860 SH2D3AQ9BRG2 576 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 IKZF4Q9H2S9 585 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 AGPAT5Q9NUQ2 364 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 LARSQ9P2J5 1176 aaKnown RBP9.62□□□□□ -0.87
SMAD4-206ENST00000588860 RBPJLQ9UBG7 517 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 ARMCX3Q9UH62 379 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-206ENST00000588860 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-206ENST00000588860 PNMA3Q9UL41 463 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 TELO2Q9Y4R8 837 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 THSD7BQ9C0I4 1608 aa9.62□□□□□ -0.87
SMAD4-206ENST00000588860 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 EPHB6O15197 1021 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ZNF862O60290 1169 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 AOC2O75106 756 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 PPP1R37O75864 691 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 AKAP3O75969 853 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 PGK2P07205 417 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 EDNRBP24530 442 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 CASP4P49662 377 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 SP2Q02086 613 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 PPP2R3AQ06190 1150 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ALCAMQ13740 583 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 KCTD2Q14681 263 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 Q3C1V9 767 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 DCAF17Q5H9S7 520 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ABHD15Q6UXT9 468 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ANO5Q75V66 913 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMAD4-206ENST00000588860 CYFIP1Q7L576 1253 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 CCDC60Q8IWA6 550 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-206ENST00000588860 FAM186BQ8IYM0 893 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms