RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CHMP4BP1P59074 171 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 PNOCQ13519 176 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 GRIK4Q16099 956 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 ANO6Q4KMQ2 910 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.17
VMP1-202ENST00000585847 ANKRD33Q7Z3H0 272 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 LINC01465Q8N7H1 131 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 PIGOQ8TEQ8 1089 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 PLIN2Q99541 437 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 TRMT13Q9NUP7 481 aaKnown RBP14.02□□□□□ -0.17
VMP1-202ENST00000585847 KCNG1Q9UIX4 513 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 KIAA1024Q9UPX6 916 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 COL1A2P08123 1366 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 MBLAC1A4D2B0 266 aaPredicted RBP14.01□□□□□ -0.17
VMP1-202ENST00000585847 E9PMD0 336 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 EYA4O95677 639 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
VMP1-202ENST00000585847 ABCD1P33897 745 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 RARRES1P49788 294 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 TLE2Q04725 743 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 FAAP100Q0VG06 881 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 PPFIA1Q13136 1202 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 LRIT3Q3SXY7 679 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 ZNF658Q5TYW1 1059 aaPredicted RBP14.01□□□□□ -0.17
VMP1-202ENST00000585847 UNC13DQ70J99 1090 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 Q7L0L9 218 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 GAS2L3Q86XJ1 694 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 DHX38Q92620 1227 aaKnown RBP14.01□□□□□ -0.17
VMP1-202ENST00000585847 FAM167AQ96KS9 214 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 TRPV6Q9H1D0 765 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 PDLIM7Q9NR12 457 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 ANKEF1Q9NU02 776 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 DBR1Q9UK59 544 aaKnown RBP14.01□□□□□ -0.17
VMP1-202ENST00000585847 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 SIP14410 1827 aa14.01□□□□□ -0.17
VMP1-202ENST00000585847 IGKV6-21A0A0C4DH24 114 aa14□□□□□ -0.17
VMP1-202ENST00000585847 C17orf102A2RUQ5 167 aa14□□□□□ -0.17
VMP1-202ENST00000585847 C22orf31O95567 290 aa14□□□□□ -0.17
VMP1-202ENST00000585847 IGBP1P78318 339 aa14□□□□□ -0.17
VMP1-202ENST00000585847 MYL5Q02045 173 aa14□□□□□ -0.17
VMP1-202ENST00000585847 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
VMP1-202ENST00000585847 TRIM71Q2Q1W2 868 aaKnown RBP14□□□□□ -0.17
VMP1-202ENST00000585847 MTERF2Q49AM1 385 aa14□□□□□ -0.17
VMP1-202ENST00000585847 FAM47CQ5HY64 1035 aa14□□□□□ -0.17
VMP1-202ENST00000585847 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
VMP1-202ENST00000585847 RUFY4Q6ZNE9 571 aa14□□□□□ -0.17
VMP1-202ENST00000585847 CCDC65Q8IXS2 484 aa14□□□□□ -0.17
VMP1-202ENST00000585847 C7orf31Q8N865 590 aa14□□□□□ -0.17
VMP1-202ENST00000585847 TOX2Q96NM4 488 aa14□□□□□ -0.17
VMP1-202ENST00000585847 PANK2Q9BZ23 570 aa14□□□□□ -0.17
VMP1-202ENST00000585847 CYP26B1Q9NR63 512 aa14□□□□□ -0.17
VMP1-202ENST00000585847 NRBP2Q9NSY0 501 aa14□□□□□ -0.17
VMP1-202ENST00000585847 EXOC1Q9NV70 894 aa14□□□□□ -0.17
VMP1-202ENST00000585847 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
VMP1-202ENST00000585847 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
VMP1-202ENST00000585847 MAN1B1Q9UKM7 699 aa14□□□□□ -0.17
VMP1-202ENST00000585847 RRN3P2A6NIE6 340 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 PSMA7O14818 248 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 PLA2G4BP0C869 781 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 GAP43P17677 238 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 KLRC1P26715 233 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 AFMP43652 599 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 ASIC1P78348 528 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 DRP2Q13474 957 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 DHX8Q14562 1220 aaKnown RBP13.99□□□□□ -0.17
VMP1-202ENST00000585847 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
VMP1-202ENST00000585847 SEZ6LQ9BYH1 1024 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 DHX33Q9H6R0 707 aaKnown RBP13.99□□□□□ -0.17
VMP1-202ENST00000585847 XPNPEP1Q9NQW7 623 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 ODF2LQ9ULJ1 636 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 STXBP5LQ9Y2K9 1186 aa13.99□□□□□ -0.17
VMP1-202ENST00000585847 A0A0C4DFX4 3053 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 BICDL2A1A5D9 508 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
VMP1-202ENST00000585847 CYP2C9P11712 490 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 SLC12A3P55017 1021 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 SPAG1Q07617 926 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 CCDC173Q0VFZ6 552 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 PTGISQ16647 500 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 DPCR1Q3MIW9 517 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 XKR9Q5GH70 373 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 TRAF7Q6Q0C0 670 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 SARM1Q6SZW1 724 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 OTUD6AQ7L8S5 288 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 SERINC5Q86VE9 423 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 EXOC8Q8IYI6 725 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
VMP1-202ENST00000585847 CEP170P1Q96L14 293 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
VMP1-202ENST00000585847 MTRQ99707 1265 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
VMP1-202ENST00000585847 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 TBX21Q9UL17 535 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 PCDHA2Q9Y5H9 948 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms