RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NME8Q8N427 588 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 METTL13Q8N6R0 699 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 TOX2Q96NM4 488 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 REEP2Q9BRK0 252 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 SEL1LQ9UBV2 794 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 COL4A3BPQ9Y5P4 624 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 B4GALT4O60513 344 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 FAM13AO94988 1023 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 GAP43P17677 238 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 ARL2P36404 184 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 ZNF200P98182 395 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-207ENST00000583965 MAPK7Q13164 816 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 CUL4BQ13620 913 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 UNC13DQ70J99 1090 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 TNS4Q8IZW8 715 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 IFT74Q96LB3 600 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
CDRT1-207ENST00000583965 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
CDRT1-207ENST00000583965 LARSQ9P2J5 1176 aaKnown RBP12.91□□□□□ -0.34
CDRT1-207ENST00000583965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 NPHP3-ACAD11A0A0J9YXS1 232 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 DCDC2CA8MYV0 355 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 CAND2O75155 1236 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 CD4P01730 458 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 RPN1P04843 607 aaKnown RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 PLS3P13797 630 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 IDEP14735 1019 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 SCP2P22307 547 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 CLCN3P51790 818 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 PNOCQ13519 176 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 KCNB1Q14721 858 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 CAMK4Q16566 473 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 DAW1Q8N136 415 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 SLC17A8Q8NDX2 589 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 TMEM143Q96AN5 459 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 SUCLA2Q9P2R7 463 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-207ENST00000583965 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
CDRT1-207ENST00000583965 RSPH10B2B2RC85 870 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 H0YCG3 227 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 KLRC4O43908 158 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 RSPH10BP0C881 870 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 MAPTP10636 758 aaKnown RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 CASP1P29466 404 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 ABCD1P33897 745 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 NAMPTP43490 491 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 SOX10P56693 466 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 POU5F1BQ06416 359 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 RBL2Q08999 1139 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 COASYQ13057 564 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 PSMD2Q13200 908 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 DMP1Q13316 513 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 TFDP1Q14186 410 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 RBM43Q6ZSC3 357 aaKnown RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 DNAJB3Q8WWF6 145 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 PRPF31Q8WWY3 499 aaKnown RBP12.89□□□□□ -0.35
CDRT1-207ENST00000583965 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 OLFML3Q9NRN5 406 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
CDRT1-207ENST00000583965 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 M0QZ92 97 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 PQBP1O60828 265 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms