RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MAP3K12Q12852 859 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 LONRF2Q1L5Z9 754 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 MTERF2Q49AM1 385 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 SCLYQ96I15 445 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 HAPLN2Q9GZV7 340 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 NRDE2Q9H7Z3 1164 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 BMP5P22003 454 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 PTGS2P35354 604 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 CNGB1Q14028 1251 aaPredicted RBP5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 ELAVL1Q15717 326 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 GAGE13Q4V321 117 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 LRCH2Q5VUJ6 765 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 ABHD17CQ6PCB6 329 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 FAM111BQ6SJ93 734 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 OTOP1Q7RTM1 612 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 GPR150Q8NGU9 434 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 SLC7A14Q8TBB6 771 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 TRIM55Q9BYV6 548 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 DENND2AQ9ULE3 1009 aa5.52□□□□□ -1.53
SMCHD1-206ENST00000581631 SLC12A8A0AV02 714 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 H2AFYO75367 372 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 PRLP01236 227 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 IL12RB1P42701 662 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 BPIFB4P59827 614 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 MBNL2Q5VZF2 373 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 CC2D1AQ6P1N0 951 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 ZNF662Q6ZS27 426 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 CLEC14AQ86T13 490 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 NTN5Q8WTR8 489 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 SLC25A43Q8WUT9 341 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 HAS1Q92839 578 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 RPL10LQ96L21 214 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 GPR87Q9BY21 358 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 SAE1Q9UBE0 346 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 MAGEL2Q9UJ55 1249 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 RBM8AQ9Y5S9 174 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 HS3ST4Q9Y661 456 aa5.51□□□□□ -1.53
SMCHD1-206ENST00000581631 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 FAM20BO75063 409 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 LMNAP02545 664 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 GCP02774 474 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 FSTL1Q12841 308 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 TCIRG1Q13488 830 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 TMEM132BQ14DG7 1078 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 NAIF1Q69YI7 327 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 MLST8Q9BVC4 326 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 NDOR1Q9UHB4 597 aa5.5□□□□□ -1.53
SMCHD1-206ENST00000581631 KCNQ2O43526 872 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 EFCAB14O75071 495 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 ZFP36P26651 326 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 FNTBP49356 437 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 RGS3P49796 1198 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 MECP2P51608 486 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 IRF9Q00978 393 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 CCDC142Q17RM4 750 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 COL4A3Q01955 1670 aa5.49□□□□□ -1.53
SMCHD1-206ENST00000581631 POLR2AP24928 1970 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 DVL2O14641 736 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 NPTXRO95502 500 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 VSIG10L2P0DP72 767 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 DGKDQ16760 1214 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 TMEM177Q53S58 311 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 FKBP15Q5T1M5 1219 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 VRK3Q8IV63 474 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 MDGA1Q8NFP4 955 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 GCDHQ92947 438 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 ZNF428Q96B54 188 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 MNTQ99583 582 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 IGSF5Q9NSI5 407 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 FZD1Q9UP38 647 aa5.48□□□□□ -1.53
SMCHD1-206ENST00000581631 TCRBV16S1A1N1A0A5B0 115 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 RASA3Q14644 834 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 ZC3H12BQ5HYM0 836 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 CKAP2LQ8IYA6 745 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 GSPT2Q8IYD1 628 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 ELOA2Q8IYF1 753 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 JMYQ8N9B5 988 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 PLA2G15Q8NCC3 412 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 ZNF764Q96H86 408 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 MAML3Q96JK9 1138 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 KDM2BQ8NHM5 1336 aa5.47□□□□□ -1.53
SMCHD1-206ENST00000581631 HIP1RO75146 1068 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 TOX4O94842 621 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 SERINC3Q13530 473 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 NBPF6Q5VWK0 638 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms