RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 APIPQ96GX9 242 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 HSPA12BQ96MM6 686 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 TBC1D32Q96NH3 1257 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 TUBGCP5Q96RT8 1024 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 MYL10Q9BUA6 226 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 ACE2Q9BYF1 805 aaPredicted RBP2.52□□□□□ -2.01
CHD3-217ENST00000574022 LRRC27Q9C0I9 530 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 KCTD10Q9H3F6 313 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 DCP1AQ9NPI6 582 aaPredicted RBP2.52□□□□□ -2.01
CHD3-217ENST00000574022 JADE2Q9NQC1 790 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 DMRT3Q9NQL9 472 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 STARD7Q9NQZ5 370 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 RIC8BQ9NVN3 520 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 ERVK13-1Q9NX77 482 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 GPRC5BQ9NZH0 403 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.52□□□□□ -2.01
CHD3-217ENST00000574022 DUSP13Q9UII6 198 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 FBXO2Q9UK22 296 aaPredicted RBP2.52□□□□□ -2.01
CHD3-217ENST00000574022 CORO2BQ9UQ03 480 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 ZNF281Q9Y2X9 895 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 NUMBLQ9Y6R0 609 aa2.52□□□□□ -2.01
CHD3-217ENST00000574022 ERBB4Q15303 1308 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A088AWK7 358 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ST20-MTHFSA0A0A6YYL1 179 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A0U1RQG5 324 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PQ27 194 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PQ64 194 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PQC6 194 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 A0A1W2PQD8 194 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 UBA6A0AVT1 1052 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 PRAMEF25A6NGN4 478 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 H3BS24 57 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 M0R3H8 397 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 FOXN3O00409 490 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 EXOC5O00471 708 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 GNB5O14775 395 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SLC27A2O14975 620 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ADAMTS3O15072 1205 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 NCK2O43639 380 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 FTLP02792 175 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 C4BPAP04003 597 aaKnown RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 RPLP2P05387 115 aaKnown RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 PYGLP06737 847 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 GSPT1P15170 499 aaKnown RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 TNFAIP3P21580 790 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SMARCA1P28370 1054 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 NOS3P29474 1203 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 WASP42768 502 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 STT3AP46977 705 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 EPHA5P54756 1037 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 NRG1Q02297 640 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 CYP27A1Q02318 531 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 TEKQ02763 1124 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ICA1Q05084 483 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 EGR3Q06889 387 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ADCY2Q08462 1091 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ZNF543Q08ER8 600 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 TUSC3Q13454 348 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 BLMHQ13867 455 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SPIDRQ14159 915 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 TRIM25Q14258 630 aaKnown RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 CHRNA2Q15822 529 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 GAB4Q2WGN9 574 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 C3orf36Q3SXR2 165 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 TTC38Q5R3I4 469 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ZBTB41Q5SVQ8 909 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 THEMIS2Q5TEJ8 643 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 STEAP3Q658P3 488 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ZNF280DQ6N043 979 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 CYP4F22Q6NT55 531 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SWSAP1Q6NVH7 229 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 GGT6Q6P531 493 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 KLHDC10Q6PID8 442 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 APOA5Q6Q788 366 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 LMBR1LQ6UX01 489 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 PDZD4Q76G19 769 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 RSRC2Q7L4I2 434 aaKnown RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 TMPRSS7Q7RTY8 843 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 GPR155Q7Z3F1 870 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 THAP5Q7Z6K1 395 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 RIOX2Q8IUF8 465 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 CREG2Q8IUH2 290 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 CLEC10AQ8IUN9 316 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SYTL1Q8IYJ3 562 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ARMC10Q8N2F6 343 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 OXR1Q8N573 874 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 LZTR1Q8N653 840 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ZNF527Q8NB42 609 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 HIPK4Q8NE63 616 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 IL17REQ8NFR9 667 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 NLGN2Q8NFZ4 835 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 OR14C36Q8NHC7 312 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 ZSCAN18Q8TBC5 510 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 TSPEARQ8WU66 669 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 RSAD2Q8WXG1 361 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 BRI3BPQ8WY22 251 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 HDAC10Q969S8 669 aa2.51□□□□□ -2.01
CHD3-217ENST00000574022 SYTL4Q96C24 671 aaPredicted RBP2.51□□□□□ -2.01
CHD3-217ENST00000574022 LTV1Q96GA3 475 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms