RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 CCDC39Q9UFE4 941 aa19.2■□□□□ 0.66
LITAF-212ENST00000573332 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 USO1O60763 962 aaKnown RBP19.19■□□□□ 0.66
LITAF-212ENST00000573332 ACTN1P12814 892 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 ARL2P36404 184 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 POU5F1BQ06416 359 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 MXD4Q14582 209 aaPredicted RBP19.19■□□□□ 0.66
LITAF-212ENST00000573332 KARSQ15046 597 aaKnown RBP19.19■□□□□ 0.66
LITAF-212ENST00000573332 ZRSR1Q15695 479 aaKnown RBP19.19■□□□□ 0.66
LITAF-212ENST00000573332 KIZQ2M2Z5 673 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 C9orf50Q5SZB4 431 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 DBF4BQ8NFT6 615 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 PRPF31Q8WWY3 499 aaKnown RBP19.19■□□□□ 0.66
LITAF-212ENST00000573332 APBB2Q92870 758 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 TMEM143Q96AN5 459 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 PCDHA7Q9UN72 937 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 CEP290O15078 2479 aa19.19■□□□□ 0.66
LITAF-212ENST00000573332 BAIAP3O94812 1187 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 GHRP10912 638 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 PLCG1P19174 1290 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 EIF4BP23588 611 aaKnown RBP19.18■□□□□ 0.66
LITAF-212ENST00000573332 ME1P48163 572 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 SLC12A3P55017 1021 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 ODR4Q5SWX8 454 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 RHPN2Q8IUC4 686 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 TMEM40Q8WWA1 233 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 SEPT8Q92599 483 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 CHAMP1Q96JM3 812 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 SPATA32Q96LK8 384 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 PLIN2Q99541 437 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 IFIH1Q9BYX4 1025 aaKnown RBP19.18■□□□□ 0.66
LITAF-212ENST00000573332 AGO3Q9H9G7 860 aaKnown RBP19.18■□□□□ 0.66
LITAF-212ENST00000573332 BLOC1S4Q9NUP1 217 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 KCND2Q9NZV8 630 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 STK17AQ9UEE5 414 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 COL4A3BPQ9Y5P4 624 aa19.18■□□□□ 0.66
LITAF-212ENST00000573332 ABHD14A-ACY1A0A1B0GW23 586 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 EFCAB14O75071 495 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 PLA2G4BP0C869 781 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
LITAF-212ENST00000573332 LAMTOR4Q0VGL1 99 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 RINT1Q6NUQ1 792 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 SHC4Q6S5L8 630 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 C1orf186Q6ZWK4 172 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 RASSF8Q8NHQ8 419 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 LRRC15Q8TF66 581 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 IPO9Q96P70 1041 aaKnown RBP19.17■□□□□ 0.66
LITAF-212ENST00000573332 OSMRQ99650 979 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 TIPINQ9BVW5 301 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 MTIF3Q9H2K0 278 aaKnown RBP19.17■□□□□ 0.66
LITAF-212ENST00000573332 BMP2KQ9NSY1 1161 aaPredicted RBP19.17■□□□□ 0.66
LITAF-212ENST00000573332 GINS2Q9Y248 185 aa19.17■□□□□ 0.66
LITAF-212ENST00000573332 A0A087WZ62 844 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 DARSP14868 501 aaKnown RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 GUCY2CP25092 1073 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 IKBKEQ14164 716 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 TCTN1Q2MV58 587 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 ADALQ6DHV7 355 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 CCDC73Q6ZRK6 1079 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 OTOP2Q7RTS6 562 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 IFNLR1Q8IU57 520 aaPredicted RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 NLRP7Q8WX94 980 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 LARP4BQ92615 738 aaKnown RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 RAD54LQ92698 747 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 FDXACB1Q9BRP7 624 aaPredicted RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 GCOM2Q9BZD3 368 aaPredicted RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 INO80BQ9C086 356 aaPredicted RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 IFT122Q9HBG6 1241 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 PADI3Q9ULW8 664 aa19.16■□□□□ 0.66
LITAF-212ENST00000573332 NOC2LQ9Y3T9 749 aaKnown RBP19.16■□□□□ 0.66
LITAF-212ENST00000573332 GPR182O15218 404 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 RPS6KA5O75582 802 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 GLRA2P23416 452 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 CD52P31358 61 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 NAALADL2Q58DX5 795 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 RRAGBQ5VZM2 374 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 RESP18Q5W5W9 173 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 KSR1Q8IVT5 923 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 KIFAP3Q92845 792 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
LITAF-212ENST00000573332 PPP1R16BQ96T49 567 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 NFKBIZQ9BYH8 718 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 POLR3FQ9H1D9 316 aaPredicted RBP19.15■□□□□ 0.66
LITAF-212ENST00000573332 ERVK-5Q9HDB9 667 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 GPRC5CQ9NQ84 441 aa19.15■□□□□ 0.66
LITAF-212ENST00000573332 ARID2Q68CP9 1835 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 PAK2Q13177 524 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 TFDP1Q14186 410 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 LRIT3Q3SXY7 679 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 FAM102BQ5T8I3 360 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 SRGAP1Q7Z6B7 1085 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 FAM228AQ86W67 206 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 ASAP3Q8TDY4 903 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 NLRP4Q96MN2 994 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 SCLT1Q96NL6 688 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 FTHL17Q9BXU8 183 aa19.14■□□□□ 0.65
LITAF-212ENST00000573332 CXXC1Q9P0U4 656 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms