RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 TMOD1P28289 359 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 ANAPC15P60006 121 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 ZP2Q05996 745 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 TBC1D8BQ0IIM8 1120 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 ADGRD2Q7Z7M1 963 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 SH2D3AQ9BRG2 576 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 LRFN3Q9BTN0 628 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
LITAF-206ENST00000571277 CWH43Q9H720 699 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 TYW1Q9NV66 732 aaKnown RBP12.78□□□□□ -0.36
LITAF-206ENST00000571277 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
LITAF-206ENST00000571277 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 PCDHGC5Q9Y5F6 944 aa12.78□□□□□ -0.36
LITAF-206ENST00000571277 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 EML1O00423 815 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 CDKL5O76039 1030 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
LITAF-206ENST00000571277 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 SMAD2Q15796 467 aaKnown RBP12.77□□□□□ -0.37
LITAF-206ENST00000571277 LETM2Q2VYF4 491 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 EARS2Q5JPH6 523 aaKnown RBP12.77□□□□□ -0.37
LITAF-206ENST00000571277 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 LRRC55Q6ZSA7 311 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 ANO5Q75V66 913 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 HAS1Q92839 578 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 MSLNLQ96KJ4 702 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
LITAF-206ENST00000571277 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
LITAF-206ENST00000571277 MBTPS2O43462 519 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 GPR37L1O60883 481 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 CSDE1O75534 798 aaKnown RBP12.76□□□□□ -0.37
LITAF-206ENST00000571277 FGF18O76093 207 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 GLP2RO95838 553 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
LITAF-206ENST00000571277 FGFR4P22455 802 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 AK2P54819 239 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 UBE3AQ05086 875 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 CLUL1Q15846 466 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 MTERF2Q49AM1 385 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 ZNF598Q86UK7 904 aaKnown RBP12.76□□□□□ -0.37
LITAF-206ENST00000571277 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 TNFRSF25Q93038 417 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 FAM20AQ96MK3 541 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 TMEM117Q9H0C3 514 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 CLEC1BQ9P126 229 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 WRAP73Q9P2S5 460 aaPredicted RBP12.76□□□□□ -0.37
LITAF-206ENST00000571277 PRKAG3Q9UGI9 489 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
LITAF-206ENST00000571277 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
LITAF-206ENST00000571277 A0A0U1RQF3 1178 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
LITAF-206ENST00000571277 LARGE1O95461 756 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 EYA4O95677 639 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 GCFC2P16383 781 aaKnown RBP12.75□□□□□ -0.37
LITAF-206ENST00000571277 NRIP1P48552 1158 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 ERVFC1P60507 584 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 PSMC5P62195 406 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 SPIRE1Q08AE8 756 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
LITAF-206ENST00000571277 ME3Q16798 604 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 TMEM31Q5JXX7 168 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 CLLU1OSQ5K130 101 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 ADHFE1Q8IWW8 467 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
LITAF-206ENST00000571277 NLRP7Q8WX94 980 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 TLR9Q9NR96 1032 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 ORC3Q9UBD5 711 aaPredicted RBP12.75□□□□□ -0.37
LITAF-206ENST00000571277 FAM50BQ9Y247 325 aa12.75□□□□□ -0.37
LITAF-206ENST00000571277 ARID2Q68CP9 1835 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 A0A087WZ62 844 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 FSCN2O14926 492 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 TBX3O15119 743 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 HOXA2O43364 376 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
LITAF-206ENST00000571277 XBP1P17861 261 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 LAG3P18627 525 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
LITAF-206ENST00000571277 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
LITAF-206ENST00000571277 NPEPPSP55786 919 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 CDC42EP1Q00587 391 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 COASYQ13057 564 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 NR5A1Q13285 461 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 KCNC3Q14003 757 aa12.74□□□□□ -0.37
LITAF-206ENST00000571277 ANKRD1Q15327 319 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms