RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
HERC1-215ENST00000561436 MLH3Q9UHC1 1453 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 PRAMEF25A6NGN4 478 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 FOXD2O60548 495 aaPredicted RBP4.96□□□□□ -1.62
HERC1-215ENST00000561436 TOM1O60784 492 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 IL13P35225 146 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 GJA9P57773 515 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 CAP1Q01518 475 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 CC2D1AQ6P1N0 951 aaPredicted RBP4.96□□□□□ -1.62
HERC1-215ENST00000561436 NOSTRINQ8IVI9 506 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 AFAP1Q8N556 730 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 NUDT10Q8NFP7 164 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 TTLL11Q8NHH1 800 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 NUDT11Q96G61 164 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 CCDC136Q96JN2 1154 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 TACO1Q9BSH4 297 aaKnown RBP4.96□□□□□ -1.62
HERC1-215ENST00000561436 MENTQ9BUN1 341 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 BDH2Q9BUT1 245 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 NGRNQ9NPE2 291 aaKnown RBP4.96□□□□□ -1.62
HERC1-215ENST00000561436 SPEF1Q9Y4P9 236 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 AGLP35573 1532 aa4.96□□□□□ -1.62
HERC1-215ENST00000561436 KATNA1O75449 491 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 IL18BPO95998 194 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 COL6A1P12109 1028 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 CD40P25942 277 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 ID4P47928 161 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 FNTBP49356 437 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 EPHA5P54756 1037 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 TMEM132BQ14DG7 1078 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 GPR158Q5T848 1215 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 GPR155Q7Z3F1 870 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 STAG1Q8WVM7 1258 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 JDP2Q8WYK2 163 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 RELTQ969Z4 430 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 PCGF6Q9BYE7 350 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 L2HGDHQ9H9P8 463 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 SPTLC3Q9NUV7 552 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 RTEL1Q9NZ71 1219 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 KLHL42Q9P2K6 505 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 NOC2LQ9Y3T9 749 aaKnown RBP4.95□□□□□ -1.62
HERC1-215ENST00000561436 B3GALT1Q9Y5Z6 326 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 CLIP1P30622 1438 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 NCOA1Q15788 1441 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 CFAP74Q9C0B2 1584 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 WASHC2CQ9Y4E1 1318 aa4.95□□□□□ -1.62
HERC1-215ENST00000561436 BCORL1Q5H9F3 1711 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 TSPOAP1O95153 1857 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC1-215ENST00000561436 ZNF839A8K0R7 811 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 FOXP2O15409 715 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 C4BPAP04003 597 aaKnown RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 CYP1A1P04798 512 aaPredicted RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 MMEP08473 750 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 SLC9A1P19634 815 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 BUD31P41223 144 aaPredicted RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 EPHB1P54762 984 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 PHC1P78364 1004 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 ADCY1Q08828 1119 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 SYDE2Q5VT97 1194 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 CNTD1Q8N815 330 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 ZNF610Q8N9Z0 462 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 DLG3Q92796 817 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 AHCYL2Q96HN2 611 aaKnown RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 TMEM209Q96SK2 561 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 USP36Q9P275 1121 aaKnown RBP4.94□□□□□ -1.62
HERC1-215ENST00000561436 ARHGAP20Q9P2F6 1191 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 PTPN22Q9Y2R2 807 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 FRMPD1Q5SYB0 1578 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 TTC37Q6PGP7 1564 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 PLA2R1Q13018 1463 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 KIF21BO75037 1637 aa4.94□□□□□ -1.62
HERC1-215ENST00000561436 ZMYM3Q14202 1370 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 RASSF10A6NK89 507 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 B4GALT3O60512 393 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 ALDH1L1O75891 902 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 ZBTB48P10074 688 aaPredicted RBP4.93□□□□□ -1.62
HERC1-215ENST00000561436 ADCY8P40145 1251 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 HERVK_113P62684 666 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 DBPQ10586 325 aaPredicted RBP4.93□□□□□ -1.62
HERC1-215ENST00000561436 TROQ12816 1431 aaPredicted RBP4.93□□□□□ -1.62
HERC1-215ENST00000561436 MTMR1Q13613 665 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 EPHA7Q15375 998 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 SAMD9Q5K651 1589 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 UBXN11Q5T124 520 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 BROXQ5VW32 411 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 LRSAM1Q6UWE0 723 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 LHFPL2Q6ZUX7 228 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 FRMD5Q7Z6J6 570 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 RASSF3Q86WH2 238 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 AMOTL1Q8IY63 956 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 HIPK4Q8NE63 616 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 WDR48Q8TAF3 677 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 COG1Q8WTW3 980 aa4.93□□□□□ -1.62
HERC1-215ENST00000561436 ERCC4Q92889 916 aaPredicted RBP4.93□□□□□ -1.62
HERC1-215ENST00000561436 YTHDC1Q96MU7 727 aaKnown RBP4.93□□□□□ -1.62
HERC1-215ENST00000561436 ELF4Q99607 663 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms