RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FOXD4L3Q6VB84 417 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 TSHZ1Q6ZSZ6 1077 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 C1orf186Q6ZWK4 172 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 ZNF365Q70YC5 407 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 ZNF410Q86VK4 478 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 LRRC15Q8TF66 581 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 PSPC1Q8WXF1 523 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 HERVK_113Q902F9 699 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 CDK5RAP3Q96JB5 506 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 SPATA32Q96LK8 384 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 CCDC43Q96MW1 224 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.695e-9■■■□□ 16.1
RABGGTA-221ENST00000561055 TIPINQ9BVW5 301 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 OSBPL7Q9BZF2 842 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 BHMT2Q9H2M3 363 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 BLOC1S4Q9NUP1 217 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 SUCLA2Q9P2R7 463 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 STK17AQ9UEE5 414 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 CCDC39Q9UFE4 941 aa10.71□□□□□ -0.69
RABGGTA-221ENST00000561055 ARHGEF35A5YM69 484 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 EFCAB14O75071 495 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 BAIAP3O94812 1187 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 VTNP04004 478 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 CTSHP09668 335 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 PLCG1P19174 1290 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 GUCY2CP25092 1073 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 LPIN1Q14693 890 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 SHHQ15465 462 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 NAALADL2Q58DX5 795 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 SPECC1Q5M775 1068 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 ODR4Q5SWX8 454 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 RESP18Q5W5W9 173 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 RINT1Q6NUQ1 792 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 TMEM40Q8WWA1 233 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 PRPF31Q8WWY3 499 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 RAD54LQ92698 747 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 APBB2Q92870 758 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 NFKBIZQ9BYH8 718 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 C17orf75Q9HAS0 396 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 COLQQ9Y215 455 aaPredicted RBP10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 AKT3Q9Y243 479 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 TRIOBPQ9H2D6 2365 aa10.7□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM237AA0A1B0GTK4 181 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ABHD14A-ACY1A0A1B0GW23 586 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 USO1O60763 962 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 PLA2G4BP0C869 781 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ACRP10323 421 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ACTN1P12814 892 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 DARSP14868 501 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 EIF4BP23588 611 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 CMA1P23946 247 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ME1P48163 572 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 TMEM62Q0P6H9 643 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 LAMTOR4Q0VGL1 99 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 IKBKEQ14164 716 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 PCBP1Q15365 356 aaKnown RBP eCLIP10.69□□□□□ -0.71e-6■■■□□ 16.1
RABGGTA-221ENST00000561055 KIZQ2M2Z5 673 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ARSHQ5FYA8 562 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 C9orf50Q5SZB4 431 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 RRAGBQ5VZM2 374 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 CCDC73Q6ZRK6 1079 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 DEFB128Q7Z7B8 93 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 RHPN2Q8IUC4 686 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 TDHQ8IZJ6 230 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 DBF4BQ8NFT6 615 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 SEPT8Q92599 483 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 LARP4BQ92615 738 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 KCNN1Q92952 543 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 PLIN2Q99541 437 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 IFIH1Q9BYX4 1025 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 INO80BQ9C086 356 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 CUEDC2Q9H467 287 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 AGO3Q9H9G7 860 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 KCNG1Q9UIX4 513 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 NLRC5Q86WI3 1866 aa10.69□□□□□ -0.7
RABGGTA-221ENST00000561055 CITO14578 2027 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 A0A087WZ62 844 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 A0A087X0B3 334 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 A0A1W2PQ27 194 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 A0A1W2PQ64 194 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 A0A1W2PQD8 194 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 GPR182O15218 404 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 RPS6KA5O75582 802 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 GHRP10912 638 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms