RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 CASP4P49662 377 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 STAT5BP51692 787 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 SMTNP53814 917 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 PEX3P56589 373 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 KCNMA1Q12791 1236 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 FAM160B1Q5W0V3 765 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 ARMCX2Q7L311 632 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 RASAL3Q86YV0 1011 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
USP3-213ENST00000559711 C12orf56Q8IXR9 622 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 TMEM161BQ8NDZ6 487 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 SCFD2Q8WU76 684 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 PPP1R13BQ96KQ4 1090 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 GPR20Q99678 358 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 ATP6V0A4Q9HBG4 840 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 IVNS1ABPQ9Y6Y0 642 aa13.93□□□□□ -0.18
USP3-213ENST00000559711 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 ZSCAN12O43309 604 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 LGR5O75473 907 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 MAPK4P31152 587 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 TCF7P36402 384 aaPredicted RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 KCNH2Q12809 1159 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 DMP1Q13316 513 aaPredicted RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 GRB14Q14449 540 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 TTLL4Q14679 1199 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 MEA1Q16626 185 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 RAD9BQ6WBX8 426 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 REXO1L1PQ8IX06 675 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 KCNN1Q92952 543 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 PCMTD1Q96MG8 357 aaPredicted RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 DHX33Q9H6R0 707 aaKnown RBP13.92□□□□□ -0.18
USP3-213ENST00000559711 AGPAT5Q9NUQ2 364 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 KCNG1Q9UIX4 513 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 PPME1Q9Y570 386 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
USP3-213ENST00000559711 RBM47A0AV96 593 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 SLC16A4O15374 487 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 HNRNPH3P31942 346 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 MTERF2Q49AM1 385 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 TOGARAM2Q6ZUX3 1019 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 PLPPR4Q7Z2D5 763 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 DHX37Q8IY37 1157 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 FAM186BQ8IYM0 893 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 CCDC155Q8N6L0 562 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 ZNF397Q8NF99 534 aaPredicted RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 BSNDQ8WZ55 320 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 C16orf45Q96MC5 204 aaPredicted RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 VTA1Q9NP79 307 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 AFPP02771 609 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 XRCC5P13010 732 aaKnown RBP13.91□□□□□ -0.18
USP3-213ENST00000559711 TNNT1P13805 278 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 RFC5P40937 340 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 EMC2Q15006 297 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 RGMBQ6NW40 437 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 WDR59Q6PJI9 974 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 MAP4K3Q8IVH8 894 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 SLC35C1Q96A29 364 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 FAM167AQ96KS9 214 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 AZI2Q9H6S1 392 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 PDGFCQ9NRA1 345 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 TBX20Q9UMR3 447 aa13.91□□□□□ -0.18
USP3-213ENST00000559711 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
USP3-213ENST00000559711 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP3-213ENST00000559711 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
USP3-213ENST00000559711 EPHB6O15197 1021 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 TUBB4AP04350 444 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 SCP2P22307 547 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 ABCD1P33897 745 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 ARL2P36404 184 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
USP3-213ENST00000559711 SOX10P56693 466 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 MCCD1P59942 119 aaPredicted RBP13.9□□□□□ -0.18
USP3-213ENST00000559711 CDK17Q00537 523 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 MTF1Q14872 753 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms